Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 AC012414.1-201ENST00000556676 535 ntBASIC16.7■□□□□ 0.26
CGB1A6NKQ9 AL139246.5-201ENST00000606645 996 ntBASIC16.7■□□□□ 0.26
CGB1A6NKQ9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.69■□□□□ 0.26
CGB1A6NKQ9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CGB1A6NKQ9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.69■□□□□ 0.26
CGB1A6NKQ9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CGB1A6NKQ9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CGB1A6NKQ9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.69■□□□□ 0.26
CGB1A6NKQ9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CGB1A6NKQ9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CGB1A6NKQ9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CGB1A6NKQ9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CGB1A6NKQ9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CGB1A6NKQ9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CGB1A6NKQ9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CGB1A6NKQ9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CGB1A6NKQ9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.69■□□□□ 0.26
CGB1A6NKQ9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CGB1A6NKQ9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 AL157384.1-201ENST00000445995 2473 ntBASIC16.68■□□□□ 0.26
CGB1A6NKQ9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.68■□□□□ 0.26
CGB1A6NKQ9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 TPRG1LP1-201ENST00000598702 760 ntBASIC16.67■□□□□ 0.26
CGB1A6NKQ9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB1A6NKQ9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CGB1A6NKQ9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms