Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEF25A6NGN4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 DUX4L2-201ENST00000561772 1275 ntBASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 DUX4L6-201ENST00000626483 1275 ntBASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 DUX4L1-201ENST00000627662 1275 ntBASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 DUX4L8-201ENST00000629013 1275 ntBASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 DUX4L3-201ENST00000630187 1275 ntBASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 DUX4L7-201ENST00000630678 1275 ntBASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 DUX4L5-201ENST00000630834 1275 ntBASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF25A6NGN4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 AC055733.4-201ENST00000638462 1354 ntBASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 AC079140.4-201ENST00000507448 529 ntBASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.59■□□□□ 0.73
PRAMEF25A6NGN4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRAMEF25A6NGN4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRAMEF25A6NGN4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRAMEF25A6NGN4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEF25A6NGN4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.58■□□□□ 0.72
PRAMEF25A6NGN4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.58■□□□□ 0.72
PRAMEF25A6NGN4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.58■□□□□ 0.72
PRAMEF25A6NGN4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.58■□□□□ 0.72
PRAMEF25A6NGN4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PRAMEF25A6NGN4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.58■□□□□ 0.72
PRAMEF25A6NGN4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEF25A6NGN4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEF25A6NGN4 LINC01521-201ENST00000504184 1943 ntBASIC19.58■□□□□ 0.72
PRAMEF25A6NGN4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PRAMEF25A6NGN4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.58■□□□□ 0.72
PRAMEF25A6NGN4 LINC01006-201ENST00000333319 2292 ntBASIC19.58■□□□□ 0.72
PRAMEF25A6NGN4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEF25A6NGN4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEF25A6NGN4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEF25A6NGN4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEF25A6NGN4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEF25A6NGN4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEF25A6NGN4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF25A6NGN4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.57■□□□□ 0.72
PRAMEF25A6NGN4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF25A6NGN4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.57■□□□□ 0.72
PRAMEF25A6NGN4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PRAMEF25A6NGN4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF25A6NGN4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.57■□□□□ 0.72
PRAMEF25A6NGN4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF25A6NGN4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.57■□□□□ 0.72
PRAMEF25A6NGN4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF25A6NGN4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF25A6NGN4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF25A6NGN4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF25A6NGN4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF25A6NGN4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF25A6NGN4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF25A6NGN4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF25A6NGN4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PRAMEF25A6NGN4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF25A6NGN4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.56■□□□□ 0.72
PRAMEF25A6NGN4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.56■□□□□ 0.72
PRAMEF25A6NGN4 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.56■□□□□ 0.72
PRAMEF25A6NGN4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.56■□□□□ 0.72
PRAMEF25A6NGN4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PRAMEF25A6NGN4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.56■□□□□ 0.72
PRAMEF25A6NGN4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.56■□□□□ 0.72
PRAMEF25A6NGN4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF25A6NGN4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF25A6NGN4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF25A6NGN4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.56■□□□□ 0.72
PRAMEF25A6NGN4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF25A6NGN4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms