Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM235A6NFC5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TMEM235A6NFC5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.82■□□□□ 0.44
TMEM235A6NFC5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TMEM235A6NFC5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.82■□□□□ 0.44
TMEM235A6NFC5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM235A6NFC5 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
TMEM235A6NFC5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TMEM235A6NFC5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TMEM235A6NFC5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.82■□□□□ 0.44
TMEM235A6NFC5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.82■□□□□ 0.44
TMEM235A6NFC5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM235A6NFC5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.82■□□□□ 0.44
TMEM235A6NFC5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM235A6NFC5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.82■□□□□ 0.44
TMEM235A6NFC5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM235A6NFC5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM235A6NFC5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 AP006587.3-201ENST00000525742 1516 ntBASIC17.81■□□□□ 0.44
TMEM235A6NFC5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM235A6NFC5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM235A6NFC5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 AC027702.1-201ENST00000563810 1770 ntBASIC17.79■□□□□ 0.44
TMEM235A6NFC5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM235A6NFC5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM235A6NFC5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.78■□□□□ 0.44
TMEM235A6NFC5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.78■□□□□ 0.44
TMEM235A6NFC5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM235A6NFC5 RARRES2P1-201ENST00000474487 481 ntBASIC17.78■□□□□ 0.44
TMEM235A6NFC5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM235A6NFC5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM235A6NFC5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM235A6NFC5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TMEM235A6NFC5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms