Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC30.26■■■□□ 2.43
CCDC144AA2RUR9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC30.26■■■□□ 2.43
CCDC144AA2RUR9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC30.26■■■□□ 2.43
CCDC144AA2RUR9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC30.25■■■□□ 2.43
CCDC144AA2RUR9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC144AA2RUR9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC30.25■■■□□ 2.43
CCDC144AA2RUR9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC144AA2RUR9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC144AA2RUR9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC30.25■■■□□ 2.43
CCDC144AA2RUR9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC144AA2RUR9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC144AA2RUR9 ECEL1P1-201ENST00000373592 1742 ntBASIC30.25■■■□□ 2.43
CCDC144AA2RUR9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CCDC144AA2RUR9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CCDC144AA2RUR9 CDV3P1-201ENST00000471403 739 ntBASIC30.24■■■□□ 2.43
CCDC144AA2RUR9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC30.24■■■□□ 2.43
CCDC144AA2RUR9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC30.24■■■□□ 2.43
CCDC144AA2RUR9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC30.24■■■□□ 2.43
CCDC144AA2RUR9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC30.24■■■□□ 2.43
CCDC144AA2RUR9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CCDC144AA2RUR9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC30.24■■■□□ 2.43
CCDC144AA2RUR9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CCDC144AA2RUR9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CCDC144AA2RUR9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCDC144AA2RUR9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCDC144AA2RUR9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC30.23■■■□□ 2.43
CCDC144AA2RUR9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CCDC144AA2RUR9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
CCDC144AA2RUR9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC30.23■■■□□ 2.43
CCDC144AA2RUR9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CCDC144AA2RUR9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC30.23■■■□□ 2.43
CCDC144AA2RUR9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCDC144AA2RUR9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC30.23■■■□□ 2.43
CCDC144AA2RUR9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC30.23■■■□□ 2.43
CCDC144AA2RUR9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCDC144AA2RUR9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC30.23■■■□□ 2.43
CCDC144AA2RUR9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC144AA2RUR9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC30.22■■■□□ 2.43
CCDC144AA2RUR9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC144AA2RUR9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC30.22■■■□□ 2.43
CCDC144AA2RUR9 KRT17P1-201ENST00000399211 1546 ntBASIC30.22■■■□□ 2.43
CCDC144AA2RUR9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC144AA2RUR9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC144AA2RUR9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC30.22■■■□□ 2.43
CCDC144AA2RUR9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC144AA2RUR9 GOLGA2P6-201ENST00000340929 2049 ntBASIC30.22■■■□□ 2.43
CCDC144AA2RUR9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC144AA2RUR9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC30.22■■■□□ 2.43
CCDC144AA2RUR9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC30.22■■■□□ 2.43
CCDC144AA2RUR9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC30.22■■■□□ 2.43
CCDC144AA2RUR9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
CCDC144AA2RUR9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC30.22■■■□□ 2.43
CCDC144AA2RUR9 AC100791.3-201ENST00000617619 330 ntBASIC30.22■■■□□ 2.43
CCDC144AA2RUR9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CCDC144AA2RUR9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CCDC144AA2RUR9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CCDC144AA2RUR9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CCDC144AA2RUR9 SAPCD2P1-201ENST00000395413 1184 ntBASIC30.21■■■□□ 2.43
CCDC144AA2RUR9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC30.2■■■□□ 2.43
CCDC144AA2RUR9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CCDC144AA2RUR9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
CCDC144AA2RUR9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
CCDC144AA2RUR9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
CCDC144AA2RUR9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CCDC144AA2RUR9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
CCDC144AA2RUR9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC30.2■■■□□ 2.42
CCDC144AA2RUR9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC30.2■■■□□ 2.42
CCDC144AA2RUR9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.42
CCDC144AA2RUR9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.42
CCDC144AA2RUR9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC144AA2RUR9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC144AA2RUR9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC144AA2RUR9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC144AA2RUR9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
CCDC144AA2RUR9 SERPINH1P1-201ENST00000419794 1249 ntBASIC30.19■■■□□ 2.42
CCDC144AA2RUR9 AL355472.2-201ENST00000422958 438 ntBASIC30.19■■■□□ 2.42
CCDC144AA2RUR9 CYP2T3P-201ENST00000601990 817 ntBASIC30.19■■■□□ 2.42
CCDC144AA2RUR9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC144AA2RUR9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC144AA2RUR9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC144AA2RUR9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC144AA2RUR9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC144AA2RUR9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC144AA2RUR9 AC007322.3-201ENST00000426526 701 ntBASIC30.18■■■□□ 2.42
CCDC144AA2RUR9 POU5F1P3-201ENST00000428824 1078 ntBASIC30.18■■■□□ 2.42
CCDC144AA2RUR9 AC097658.1-201ENST00000475555 843 ntBASIC30.18■■■□□ 2.42
CCDC144AA2RUR9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC30.18■■■□□ 2.42
CCDC144AA2RUR9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC144AA2RUR9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC144AA2RUR9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC144AA2RUR9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC30.17■■■□□ 2.42
CCDC144AA2RUR9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC144AA2RUR9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC144AA2RUR9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC30.17■■■□□ 2.42
CCDC144AA2RUR9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC144AA2RUR9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC144AA2RUR9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC144AA2RUR9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC144AA2RUR9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC144AA2RUR9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms