Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC189A1A4V9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CCDC189A1A4V9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC189A1A4V9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC189A1A4V9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC189A1A4V9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC189A1A4V9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC189A1A4V9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC189A1A4V9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC189A1A4V9 AC024257.2-201ENST00000549699 147 ntBASIC20.83■□□□□ 0.93
CCDC189A1A4V9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.83■□□□□ 0.93
CCDC189A1A4V9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.83■□□□□ 0.92
CCDC189A1A4V9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC189A1A4V9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CCDC189A1A4V9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC189A1A4V9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC189A1A4V9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.83■□□□□ 0.92
CCDC189A1A4V9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.83■□□□□ 0.92
CCDC189A1A4V9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC189A1A4V9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.83■□□□□ 0.92
CCDC189A1A4V9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC189A1A4V9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC189A1A4V9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC189A1A4V9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC189A1A4V9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
CCDC189A1A4V9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC189A1A4V9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC189A1A4V9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC189A1A4V9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC189A1A4V9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC189A1A4V9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC189A1A4V9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCDC189A1A4V9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC189A1A4V9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC189A1A4V9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC189A1A4V9 LINC01521-201ENST00000504184 1943 ntBASIC20.82■□□□□ 0.92
CCDC189A1A4V9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC189A1A4V9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC189A1A4V9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC189A1A4V9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC189A1A4V9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC189A1A4V9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC189A1A4V9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC189A1A4V9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CCDC189A1A4V9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC189A1A4V9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC189A1A4V9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC189A1A4V9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC189A1A4V9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC189A1A4V9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CCDC189A1A4V9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC189A1A4V9 AC126544.1-201ENST00000580842 1059 ntBASIC20.81■□□□□ 0.92
CCDC189A1A4V9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC189A1A4V9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC189A1A4V9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC189A1A4V9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC189A1A4V9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC189A1A4V9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC189A1A4V9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC189A1A4V9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC189A1A4V9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC189A1A4V9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC189A1A4V9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC189A1A4V9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC189A1A4V9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC189A1A4V9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC189A1A4V9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC189A1A4V9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC189A1A4V9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CCDC189A1A4V9 AC027682.1-201ENST00000562846 899 ntBASIC20.8■□□□□ 0.92
CCDC189A1A4V9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC189A1A4V9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC189A1A4V9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CCDC189A1A4V9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC189A1A4V9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC189A1A4V9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC189A1A4V9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC189A1A4V9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC189A1A4V9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC189A1A4V9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC189A1A4V9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC189A1A4V9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC189A1A4V9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
CCDC189A1A4V9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC189A1A4V9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CCDC189A1A4V9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC189A1A4V9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC189A1A4V9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC189A1A4V9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC189A1A4V9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC189A1A4V9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC189A1A4V9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CCDC189A1A4V9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC189A1A4V9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CCDC189A1A4V9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms