Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV3S1A0A5B6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.6■□□□□ 0.73
TCRBV3S1A0A5B6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.6■□□□□ 0.73
TCRBV3S1A0A5B6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.6■□□□□ 0.73
TCRBV3S1A0A5B6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV3S1A0A5B6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV3S1A0A5B6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV3S1A0A5B6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV3S1A0A5B6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV3S1A0A5B6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV3S1A0A5B6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.6■□□□□ 0.73
TCRBV3S1A0A5B6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV3S1A0A5B6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.59■□□□□ 0.73
TCRBV3S1A0A5B6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV3S1A0A5B6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV3S1A0A5B6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV3S1A0A5B6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV3S1A0A5B6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TCRBV3S1A0A5B6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.59■□□□□ 0.73
TCRBV3S1A0A5B6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.59■□□□□ 0.73
TCRBV3S1A0A5B6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV3S1A0A5B6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TCRBV3S1A0A5B6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.59■□□□□ 0.73
TCRBV3S1A0A5B6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.59■□□□□ 0.73
TCRBV3S1A0A5B6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TCRBV3S1A0A5B6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV3S1A0A5B6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV3S1A0A5B6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV3S1A0A5B6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV3S1A0A5B6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
TCRBV3S1A0A5B6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
TCRBV3S1A0A5B6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TCRBV3S1A0A5B6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TCRBV3S1A0A5B6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TCRBV3S1A0A5B6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.58■□□□□ 0.72
TCRBV3S1A0A5B6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.58■□□□□ 0.72
TCRBV3S1A0A5B6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBV3S1A0A5B6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBV3S1A0A5B6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBV3S1A0A5B6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TCRBV3S1A0A5B6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBV3S1A0A5B6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV3S1A0A5B6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV3S1A0A5B6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TCRBV3S1A0A5B6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TCRBV3S1A0A5B6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV3S1A0A5B6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV3S1A0A5B6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TCRBV3S1A0A5B6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TCRBV3S1A0A5B6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.57■□□□□ 0.72
TCRBV3S1A0A5B6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV3S1A0A5B6 AC010997.5-201ENST00000609182 354 ntBASIC19.57■□□□□ 0.72
TCRBV3S1A0A5B6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TCRBV3S1A0A5B6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.57■□□□□ 0.72
TCRBV3S1A0A5B6 BX323043.1-201ENST00000641006 1765 ntBASIC19.57■□□□□ 0.72
TCRBV3S1A0A5B6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV3S1A0A5B6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV3S1A0A5B6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV3S1A0A5B6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV3S1A0A5B6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV3S1A0A5B6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV3S1A0A5B6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TCRBV3S1A0A5B6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.56■□□□□ 0.72
TCRBV3S1A0A5B6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV3S1A0A5B6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
TCRBV3S1A0A5B6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.56■□□□□ 0.72
TCRBV3S1A0A5B6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.56■□□□□ 0.72
TCRBV3S1A0A5B6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.56■□□□□ 0.72
TCRBV3S1A0A5B6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV3S1A0A5B6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.56■□□□□ 0.72
TCRBV3S1A0A5B6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.56■□□□□ 0.72
TCRBV3S1A0A5B6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV3S1A0A5B6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV3S1A0A5B6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV3S1A0A5B6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 AC018445.3-201ENST00000624177 1945 ntBASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV3S1A0A5B6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms