Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-9A0A0J9YWB2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 UNC93B3-201ENST00000308076 687 ntBASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 AC055733.4-201ENST00000638462 1354 ntBASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-9A0A0J9YWB2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-9A0A0J9YWB2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 AC006128.1-201ENST00000624704 1661 ntBASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 AC135279.3-201ENST00000610945 1311 ntBASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 AL136162.1-201ENST00000607711 1078 ntBASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-9A0A0J9YWB2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-9A0A0J9YWB2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-9A0A0J9YWB2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-9A0A0J9YWB2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-9A0A0J9YWB2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-9A0A0J9YWB2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-9A0A0J9YWB2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-9A0A0J9YWB2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV7-9A0A0J9YWB2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-9A0A0J9YWB2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms