Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 AC005181.1-201ENST00000604782 1256 ntBASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IGHV4-28A0A0C4DH34 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 ID1-201ENST00000376105 1233 ntBASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 TERF1P5-201ENST00000477545 1207 ntBASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 AC013268.1-206ENST00000638368 961 ntBASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 AC112229.1-201ENST00000639295 961 ntBASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IGHV4-28A0A0C4DH34 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 CNN2P6-201ENST00000439038 900 ntBASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IGHV4-28A0A0C4DH34 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.08■□□□□ 0.01
IGHV4-28A0A0C4DH34 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.08■□□□□ 0.01
IGHV4-28A0A0C4DH34 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
IGHV4-28A0A0C4DH34 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
IGHV4-28A0A0C4DH34 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.08■□□□□ 0.01
IGHV4-28A0A0C4DH34 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
IGHV4-28A0A0C4DH34 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
IGHV4-28A0A0C4DH34 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IGHV4-28A0A0C4DH34 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
IGHV4-28A0A0C4DH34 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC15.08■□□□□ 0
IGHV4-28A0A0C4DH34 HLA-L-209ENST00000420110 1011 ntBASIC15.08■□□□□ 0
IGHV4-28A0A0C4DH34 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.08■□□□□ 0
IGHV4-28A0A0C4DH34 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.08■□□□□ 0
IGHV4-28A0A0C4DH34 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.08■□□□□ 0
IGHV4-28A0A0C4DH34 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.08■□□□□ 0
IGHV4-28A0A0C4DH34 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.08■□□□□ 0
IGHV4-28A0A0C4DH34 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.08■□□□□ 0
IGHV4-28A0A0C4DH34 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IGHV4-28A0A0C4DH34 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms