Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV10A0A0B4J240 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
TRAV10A0A0B4J240 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV10A0A0B4J240 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV10A0A0B4J240 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV10A0A0B4J240 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV10A0A0B4J240 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 AC016405.3-201ENST00000607710 860 ntBASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV10A0A0B4J240 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV10A0A0B4J240 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV10A0A0B4J240 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV10A0A0B4J240 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV10A0A0B4J240 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
TRAV10A0A0B4J240 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV10A0A0B4J240 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV10A0A0B4J240 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV10A0A0B4J240 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV10A0A0B4J240 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV10A0A0B4J240 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV10A0A0B4J240 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV10A0A0B4J240 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV10A0A0B4J240 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV10A0A0B4J240 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV10A0A0B4J240 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV10A0A0B4J240 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAV10A0A0B4J240 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 MIPEPP3-201ENST00000412105 444 ntBASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 CDV3P1-201ENST00000471403 739 ntBASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 FAM99A-202ENST00000538190 1989 ntBASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV10A0A0B4J240 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV10A0A0B4J240 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRAV10A0A0B4J240 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV10A0A0B4J240 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV10A0A0B4J240 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV10A0A0B4J240 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
TRAV10A0A0B4J240 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV10A0A0B4J240 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV10A0A0B4J240 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV10A0A0B4J240 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRAV10A0A0B4J240 RARRES2P4-201ENST00000514074 484 ntBASIC14.72□□□□□ -0.05
TRAV10A0A0B4J240 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAV10A0A0B4J240 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV10A0A0B4J240 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV10A0A0B4J240 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms