Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV2A0A0B4J234 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV2A0A0B4J234 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV2A0A0B4J234 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV2A0A0B4J234 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV2A0A0B4J234 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.78■□□□□ 0.12
TRAV2A0A0B4J234 KRT18P20-201ENST00000548986 1279 ntBASIC15.78■□□□□ 0.12
TRAV2A0A0B4J234 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV2A0A0B4J234 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV2A0A0B4J234 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRAV2A0A0B4J234 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV2A0A0B4J234 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV2A0A0B4J234 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV2A0A0B4J234 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV2A0A0B4J234 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRAV2A0A0B4J234 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV2A0A0B4J234 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV2A0A0B4J234 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV2A0A0B4J234 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV2A0A0B4J234 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRAV2A0A0B4J234 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV2A0A0B4J234 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV2A0A0B4J234 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV2A0A0B4J234 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV2A0A0B4J234 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV2A0A0B4J234 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.77■□□□□ 0.12
TRAV2A0A0B4J234 RARRES2P6-201ENST00000567333 442 ntBASIC15.77■□□□□ 0.12
TRAV2A0A0B4J234 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV2A0A0B4J234 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV2A0A0B4J234 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
TRAV2A0A0B4J234 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.77■□□□□ 0.11
TRAV2A0A0B4J234 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TRAV2A0A0B4J234 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.77■□□□□ 0.11
TRAV2A0A0B4J234 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.77■□□□□ 0.11
TRAV2A0A0B4J234 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV2A0A0B4J234 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV2A0A0B4J234 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
TRAV2A0A0B4J234 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV2A0A0B4J234 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 AP004607.4-201ENST00000530158 1459 ntBASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 KRT16P2-201ENST00000414673 1423 ntBASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV2A0A0B4J234 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV2A0A0B4J234 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV2A0A0B4J234 Z98882.1-201ENST00000622160 2253 ntBASIC15.75■□□□□ 0.11
TRAV2A0A0B4J234 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV2A0A0B4J234 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV2A0A0B4J234 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV2A0A0B4J234 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV2A0A0B4J234 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV2A0A0B4J234 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV2A0A0B4J234 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAV2A0A0B4J234 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV2A0A0B4J234 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
TRAV2A0A0B4J234 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV2A0A0B4J234 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV2A0A0B4J234 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV2A0A0B4J234 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV2A0A0B4J234 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 AC026271.2-201ENST00000428091 497 ntBASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 AP001160.3-201ENST00000601484 763 ntBASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 AC087623.3-201ENST00000607047 1098 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms