Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.8■□□□□ 0.6
TRGV5A0A0B4J1U4 KRT18P6-201ENST00000555540 1265 ntBASIC18.8■□□□□ 0.6
TRGV5A0A0B4J1U4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.8■□□□□ 0.6
TRGV5A0A0B4J1U4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV5A0A0B4J1U4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV5A0A0B4J1U4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV5A0A0B4J1U4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV5A0A0B4J1U4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV5A0A0B4J1U4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV5A0A0B4J1U4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV5A0A0B4J1U4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV5A0A0B4J1U4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRGV5A0A0B4J1U4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV5A0A0B4J1U4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV5A0A0B4J1U4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.79■□□□□ 0.6
TRGV5A0A0B4J1U4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV5A0A0B4J1U4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV5A0A0B4J1U4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV5A0A0B4J1U4 BX276092.2-201ENST00000417668 665 ntBASIC18.79■□□□□ 0.6
TRGV5A0A0B4J1U4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV5A0A0B4J1U4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.79■□□□□ 0.6
TRGV5A0A0B4J1U4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV5A0A0B4J1U4 AC098934.4-201ENST00000564127 592 ntBASIC18.79■□□□□ 0.6
TRGV5A0A0B4J1U4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.79■□□□□ 0.6
TRGV5A0A0B4J1U4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRGV5A0A0B4J1U4 ECEL1P1-201ENST00000373592 1742 ntBASIC18.79■□□□□ 0.6
TRGV5A0A0B4J1U4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV5A0A0B4J1U4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV5A0A0B4J1U4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV5A0A0B4J1U4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV5A0A0B4J1U4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV5A0A0B4J1U4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV5A0A0B4J1U4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV5A0A0B4J1U4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV5A0A0B4J1U4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV5A0A0B4J1U4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV5A0A0B4J1U4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV5A0A0B4J1U4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV5A0A0B4J1U4 AC010980.2-201ENST00000587099 1412 ntBASIC18.77■□□□□ 0.6
TRGV5A0A0B4J1U4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV5A0A0B4J1U4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TRGV5A0A0B4J1U4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV5A0A0B4J1U4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
TRGV5A0A0B4J1U4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.77■□□□□ 0.6
TRGV5A0A0B4J1U4 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.77■□□□□ 0.6
TRGV5A0A0B4J1U4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.77■□□□□ 0.6
TRGV5A0A0B4J1U4 AC092118.2-201ENST00000613495 667 ntBASIC18.77■□□□□ 0.6
TRGV5A0A0B4J1U4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.77■□□□□ 0.6
TRGV5A0A0B4J1U4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV5A0A0B4J1U4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV5A0A0B4J1U4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV5A0A0B4J1U4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRGV5A0A0B4J1U4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRGV5A0A0B4J1U4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV5A0A0B4J1U4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.76■□□□□ 0.59
TRGV5A0A0B4J1U4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV5A0A0B4J1U4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.76■□□□□ 0.59
TRGV5A0A0B4J1U4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.76■□□□□ 0.59
TRGV5A0A0B4J1U4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV5A0A0B4J1U4 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.76■□□□□ 0.59
TRGV5A0A0B4J1U4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV5A0A0B4J1U4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV5A0A0B4J1U4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV5A0A0B4J1U4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV5A0A0B4J1U4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV5A0A0B4J1U4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRGV5A0A0B4J1U4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.76■□□□□ 0.59
TRGV5A0A0B4J1U4 FAM21FP-204ENST00000608637 956 ntBASIC18.76■□□□□ 0.59
TRGV5A0A0B4J1U4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.76■□□□□ 0.59
TRGV5A0A0B4J1U4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV5A0A0B4J1U4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRGV5A0A0B4J1U4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRGV5A0A0B4J1U4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.75■□□□□ 0.59
TRGV5A0A0B4J1U4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRGV5A0A0B4J1U4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRGV5A0A0B4J1U4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.75■□□□□ 0.59
TRGV5A0A0B4J1U4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRGV5A0A0B4J1U4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms