Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC187A0A096LP49 UBE2SP1-201ENST00000450587 669 ntBASIC19.89■□□□□ 0.77
CCDC187A0A096LP49 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC187A0A096LP49 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC187A0A096LP49 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CCDC187A0A096LP49 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC187A0A096LP49 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC187A0A096LP49 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC187A0A096LP49 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC187A0A096LP49 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC187A0A096LP49 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC187A0A096LP49 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC187A0A096LP49 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC187A0A096LP49 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
CCDC187A0A096LP49 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC187A0A096LP49 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC187A0A096LP49 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC187A0A096LP49 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC187A0A096LP49 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC187A0A096LP49 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC187A0A096LP49 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC187A0A096LP49 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC187A0A096LP49 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC187A0A096LP49 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC187A0A096LP49 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC187A0A096LP49 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC187A0A096LP49 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC187A0A096LP49 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC187A0A096LP49 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC187A0A096LP49 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC187A0A096LP49 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC187A0A096LP49 MCRIP2P1-201ENST00000394346 511 ntBASIC19.87■□□□□ 0.77
CCDC187A0A096LP49 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC187A0A096LP49 AC008550.1-201ENST00000511500 884 ntBASIC19.87■□□□□ 0.77
CCDC187A0A096LP49 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC187A0A096LP49 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC187A0A096LP49 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC187A0A096LP49 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC187A0A096LP49 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC187A0A096LP49 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC187A0A096LP49 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCDC187A0A096LP49 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 AC008403.3-201ENST00000598924 454 ntBASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 AL359736.2-201ENST00000621992 437 ntBASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 AC092053.2-201ENST00000640557 1818 ntBASIC19.86■□□□□ 0.77
CCDC187A0A096LP49 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC187A0A096LP49 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC187A0A096LP49 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC187A0A096LP49 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC187A0A096LP49 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC187A0A096LP49 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC187A0A096LP49 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC187A0A096LP49 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC187A0A096LP49 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC187A0A096LP49 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC187A0A096LP49 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.84■□□□□ 0.77
CCDC187A0A096LP49 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC187A0A096LP49 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms