Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 AC106739.1-201ENST00000617035 715 ntBASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 AC096631.2-201ENST00000436136 790 ntBASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 AL355001.2-201ENST00000620617 1191 ntBASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 TSPY26P-201ENST00000476365 1326 ntBASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV30A0A087WSZ9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV30A0A087WSZ9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV30A0A087WSZ9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV30A0A087WSZ9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV30A0A087WSZ9 BX005040.4-201ENST00000637145 1518 ntBASIC16.36■□□□□ 0.21
TRAV30A0A087WSZ9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV30A0A087WSZ9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRAV30A0A087WSZ9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.36■□□□□ 0.21
TRAV30A0A087WSZ9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.36■□□□□ 0.21
TRAV30A0A087WSZ9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV30A0A087WSZ9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV30A0A087WSZ9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV30A0A087WSZ9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRAV30A0A087WSZ9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV30A0A087WSZ9 RASA4CP-201ENST00000424092 1398 ntBASIC16.36■□□□□ 0.21
TRAV30A0A087WSZ9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV30A0A087WSZ9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV30A0A087WSZ9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 AC005224.4-201ENST00000583262 1652 ntBASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 MIR572-201ENST00000384983 95 ntBASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 AC055733.4-201ENST00000638462 1354 ntBASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV30A0A087WSZ9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRAV30A0A087WSZ9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRAV30A0A087WSZ9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV30A0A087WSZ9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRAV30A0A087WSZ9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRAV30A0A087WSZ9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TRAV30A0A087WSZ9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV30A0A087WSZ9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV30A0A087WSZ9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV30A0A087WSZ9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV30A0A087WSZ9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV30A0A087WSZ9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms