Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
HLA-DRB4X5D2U9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRB4X5D2U9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRB4X5D2U9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DRB4X5D2U9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 ZNRF2P3-201ENST00000424200 374 ntBASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 AC026310.3-201ENST00000625186 2373 ntBASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
HLA-DRB4X5D2U9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRB4X5D2U9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.71■□□□□ 0.11
HLA-DRB4X5D2U9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRB4X5D2U9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DRB4X5D2U9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRB4X5D2U9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRB4X5D2U9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRB4X5D2U9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRB4X5D2U9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRB4X5D2U9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRB4X5D2U9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRB4X5D2U9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DRB4X5D2U9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRB4X5D2U9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DRB4X5D2U9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRB4X5D2U9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HLA-DRB4X5D2U9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DRB4X5D2U9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DRB4X5D2U9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.71■□□□□ 0.1
HLA-DRB4X5D2U9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DRB4X5D2U9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DRB4X5D2U9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DRB4X5D2U9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 YBX1P1-201ENST00000445822 960 ntBASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 LINC02228-203ENST00000641970 1355 ntBASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HLA-DRB4X5D2U9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DRB4X5D2U9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DRB4X5D2U9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DRB4X5D2U9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DRB4X5D2U9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HLA-DRB4X5D2U9 AC123595.1-201ENST00000440769 1046 ntBASIC15.69■□□□□ 0.1
HLA-DRB4X5D2U9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.69■□□□□ 0.1
HLA-DRB4X5D2U9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.69■□□□□ 0.1
HLA-DRB4X5D2U9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.69■□□□□ 0.1
HLA-DRB4X5D2U9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DRB4X5D2U9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DRB4X5D2U9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms