Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA6Q9Y5G7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA6Q9Y5G7 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHGA6Q9Y5G7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.15■□□□□ 0.82
PCDHGA6Q9Y5G7 KRT18P20-201ENST00000548986 1279 ntBASIC20.15■□□□□ 0.82
PCDHGA6Q9Y5G7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHGA6Q9Y5G7 AL050303.2-201ENST00000619798 666 ntBASIC20.15■□□□□ 0.82
PCDHGA6Q9Y5G7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA6Q9Y5G7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA6Q9Y5G7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA6Q9Y5G7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA6Q9Y5G7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGA6Q9Y5G7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGA6Q9Y5G7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA6Q9Y5G7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA6Q9Y5G7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA6Q9Y5G7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCDHGA6Q9Y5G7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA6Q9Y5G7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA6Q9Y5G7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA6Q9Y5G7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA6Q9Y5G7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDHGA6Q9Y5G7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGA6Q9Y5G7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PCDHGA6Q9Y5G7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
PCDHGA6Q9Y5G7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHGA6Q9Y5G7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA6Q9Y5G7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PCDHGA6Q9Y5G7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA6Q9Y5G7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 TSPY6P-201ENST00000448518 926 ntBASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 AC010141.2-201ENST00000452426 721 ntBASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 AC083906.2-201ENST00000511578 360 ntBASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 AC138907.5-202ENST00000569484 235 ntBASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 AC005181.1-201ENST00000604782 1256 ntBASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA6Q9Y5G7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA6Q9Y5G7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA6Q9Y5G7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA6Q9Y5G7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGA6Q9Y5G7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGA6Q9Y5G7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGA6Q9Y5G7 SLC7A5P2-201ENST00000553010 536 ntBASIC20.12■□□□□ 0.81
PCDHGA6Q9Y5G7 AL034346.1-201ENST00000568244 1277 ntBASIC20.12■□□□□ 0.81
PCDHGA6Q9Y5G7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDHGA6Q9Y5G7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGA6Q9Y5G7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHGA6Q9Y5G7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
PCDHGA6Q9Y5G7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PCDHGA6Q9Y5G7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA6Q9Y5G7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGA6Q9Y5G7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
PCDHGA6Q9Y5G7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDHGA6Q9Y5G7 AP004607.7-201ENST00000527152 1677 ntBASIC20.11■□□□□ 0.81
PCDHGA6Q9Y5G7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA6Q9Y5G7 ABHD17AP1-201ENST00000358206 933 ntBASIC20.11■□□□□ 0.81
PCDHGA6Q9Y5G7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDHGA6Q9Y5G7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA6Q9Y5G7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA6Q9Y5G7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PCDHGA6Q9Y5G7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA6Q9Y5G7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA6Q9Y5G7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA6Q9Y5G7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA6Q9Y5G7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA6Q9Y5G7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA6Q9Y5G7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGA6Q9Y5G7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA6Q9Y5G7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHGA6Q9Y5G7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA6Q9Y5G7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA6Q9Y5G7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA6Q9Y5G7 GUSBP6-202ENST00000438529 1198 ntBASIC20.1■□□□□ 0.81
PCDHGA6Q9Y5G7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHGA6Q9Y5G7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA6Q9Y5G7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PCDHGA6Q9Y5G7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA6Q9Y5G7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHGA6Q9Y5G7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PCDHGA6Q9Y5G7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA6Q9Y5G7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
PCDHGA6Q9Y5G7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PCDHGA6Q9Y5G7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms