Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4S1Q9Y587 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.79■□□□□ 0.76
AP4S1Q9Y587 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4S1Q9Y587 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4S1Q9Y587 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4S1Q9Y587 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4S1Q9Y587 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4S1Q9Y587 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4S1Q9Y587 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4S1Q9Y587 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.79■□□□□ 0.76
AP4S1Q9Y587 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4S1Q9Y587 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4S1Q9Y587 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.78■□□□□ 0.76
AP4S1Q9Y587 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4S1Q9Y587 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4S1Q9Y587 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
AP4S1Q9Y587 AC003102.1-202ENST00000563394 1796 ntBASIC19.78■□□□□ 0.76
AP4S1Q9Y587 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
AP4S1Q9Y587 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AP4S1Q9Y587 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
AP4S1Q9Y587 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.78■□□□□ 0.76
AP4S1Q9Y587 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AP4S1Q9Y587 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.78■□□□□ 0.76
AP4S1Q9Y587 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4S1Q9Y587 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
AP4S1Q9Y587 AC020907.5-201ENST00000624372 1936 ntBASIC19.78■□□□□ 0.76
AP4S1Q9Y587 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4S1Q9Y587 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4S1Q9Y587 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4S1Q9Y587 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP4S1Q9Y587 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
AP4S1Q9Y587 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP4S1Q9Y587 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP4S1Q9Y587 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP4S1Q9Y587 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP4S1Q9Y587 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP4S1Q9Y587 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP4S1Q9Y587 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.77■□□□□ 0.76
AP4S1Q9Y587 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
AP4S1Q9Y587 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.77■□□□□ 0.76
AP4S1Q9Y587 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
AP4S1Q9Y587 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP4S1Q9Y587 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.77■□□□□ 0.76
AP4S1Q9Y587 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.77■□□□□ 0.76
AP4S1Q9Y587 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.77■□□□□ 0.76
AP4S1Q9Y587 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.77■□□□□ 0.76
AP4S1Q9Y587 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
AP4S1Q9Y587 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.77■□□□□ 0.76
AP4S1Q9Y587 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
AP4S1Q9Y587 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
AP4S1Q9Y587 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.76■□□□□ 0.75
AP4S1Q9Y587 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
AP4S1Q9Y587 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4S1Q9Y587 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4S1Q9Y587 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4S1Q9Y587 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4S1Q9Y587 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4S1Q9Y587 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4S1Q9Y587 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
AP4S1Q9Y587 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.75■□□□□ 0.75
AP4S1Q9Y587 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
AP4S1Q9Y587 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.75■□□□□ 0.75
AP4S1Q9Y587 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4S1Q9Y587 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.75■□□□□ 0.75
AP4S1Q9Y587 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.75■□□□□ 0.75
AP4S1Q9Y587 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4S1Q9Y587 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP4S1Q9Y587 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.74■□□□□ 0.75
AP4S1Q9Y587 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
AP4S1Q9Y587 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.74■□□□□ 0.75
AP4S1Q9Y587 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms