Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
LRRC42Q9Y546 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC42Q9Y546 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRC42Q9Y546 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC42Q9Y546 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRC42Q9Y546 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC42Q9Y546 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRC42Q9Y546 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC42Q9Y546 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC42Q9Y546 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC42Q9Y546 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRC42Q9Y546 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC42Q9Y546 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
LRRC42Q9Y546 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC42Q9Y546 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
LRRC42Q9Y546 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LRRC42Q9Y546 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
LRRC42Q9Y546 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.75
LRRC42Q9Y546 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
LRRC42Q9Y546 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC42Q9Y546 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC42Q9Y546 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC42Q9Y546 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LRRC42Q9Y546 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
LRRC42Q9Y546 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
LRRC42Q9Y546 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC42Q9Y546 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC42Q9Y546 AC007225.1-201ENST00000566331 1836 ntBASIC19.76■□□□□ 0.75
LRRC42Q9Y546 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LRRC42Q9Y546 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC42Q9Y546 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC42Q9Y546 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC42Q9Y546 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
LRRC42Q9Y546 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
LRRC42Q9Y546 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC42Q9Y546 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC42Q9Y546 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.75■□□□□ 0.75
LRRC42Q9Y546 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.75■□□□□ 0.75
LRRC42Q9Y546 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
LRRC42Q9Y546 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC42Q9Y546 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.75■□□□□ 0.75
LRRC42Q9Y546 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC42Q9Y546 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC42Q9Y546 AC011551.1-201ENST00000614101 683 ntBASIC19.75■□□□□ 0.75
LRRC42Q9Y546 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC42Q9Y546 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC42Q9Y546 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LRRC42Q9Y546 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC42Q9Y546 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC42Q9Y546 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
LRRC42Q9Y546 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC42Q9Y546 AC125437.2-201ENST00000625180 2167 ntBASIC19.74■□□□□ 0.75
LRRC42Q9Y546 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.74■□□□□ 0.75
LRRC42Q9Y546 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC42Q9Y546 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC42Q9Y546 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.74■□□□□ 0.75
LRRC42Q9Y546 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.74■□□□□ 0.75
LRRC42Q9Y546 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
LRRC42Q9Y546 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
LRRC42Q9Y546 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
LRRC42Q9Y546 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
LRRC42Q9Y546 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC42Q9Y546 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LRRC42Q9Y546 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC42Q9Y546 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
LRRC42Q9Y546 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC42Q9Y546 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.73■□□□□ 0.75
LRRC42Q9Y546 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC42Q9Y546 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC42Q9Y546 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC42Q9Y546 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC42Q9Y546 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC42Q9Y546 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC42Q9Y546 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC42Q9Y546 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC42Q9Y546 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
LRRC42Q9Y546 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
LRRC42Q9Y546 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
LRRC42Q9Y546 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.73■□□□□ 0.75
LRRC42Q9Y546 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
LRRC42Q9Y546 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC42Q9Y546 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.73■□□□□ 0.75
LRRC42Q9Y546 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.73■□□□□ 0.75
LRRC42Q9Y546 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.73■□□□□ 0.75
LRRC42Q9Y546 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC42Q9Y546 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC42Q9Y546 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC42Q9Y546 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.72■□□□□ 0.75
LRRC42Q9Y546 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC42Q9Y546 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC42Q9Y546 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC42Q9Y546 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC42Q9Y546 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC42Q9Y546 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC42Q9Y546 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.72■□□□□ 0.75
LRRC42Q9Y546 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC42Q9Y546 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC42Q9Y546 AL158211.5-201ENST00000623583 2518 ntBASIC19.72■□□□□ 0.75
LRRC42Q9Y546 AC093503.3-201ENST00000624917 2352 ntBASIC19.72■□□□□ 0.75
LRRC42Q9Y546 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms