Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1DQ9Y2S0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1DQ9Y2S0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1DQ9Y2S0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1DQ9Y2S0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR1DQ9Y2S0 BX005040.4-201ENST00000637145 1518 ntBASIC18.66■□□□□ 0.58
POLR1DQ9Y2S0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1DQ9Y2S0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
POLR1DQ9Y2S0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.66■□□□□ 0.58
POLR1DQ9Y2S0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR1DQ9Y2S0 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR1DQ9Y2S0 AL136967.2-201ENST00000623968 743 ntBASIC18.66■□□□□ 0.58
POLR1DQ9Y2S0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1DQ9Y2S0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
POLR1DQ9Y2S0 AF106564.1-201ENST00000607058 2553 ntBASIC18.66■□□□□ 0.58
POLR1DQ9Y2S0 FEM1AP4-201ENST00000443167 1987 ntBASIC18.66■□□□□ 0.58
POLR1DQ9Y2S0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
POLR1DQ9Y2S0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR1DQ9Y2S0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.66■□□□□ 0.58
POLR1DQ9Y2S0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.65■□□□□ 0.58
POLR1DQ9Y2S0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
POLR1DQ9Y2S0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
POLR1DQ9Y2S0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
POLR1DQ9Y2S0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1DQ9Y2S0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
POLR1DQ9Y2S0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1DQ9Y2S0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1DQ9Y2S0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
POLR1DQ9Y2S0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.64■□□□□ 0.57
POLR1DQ9Y2S0 AL031432.3-201ENST00000607698 485 ntBASIC18.64■□□□□ 0.57
POLR1DQ9Y2S0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.64■□□□□ 0.57
POLR1DQ9Y2S0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.64■□□□□ 0.57
POLR1DQ9Y2S0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1DQ9Y2S0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1DQ9Y2S0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1DQ9Y2S0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1DQ9Y2S0 AC005224.4-201ENST00000583262 1652 ntBASIC18.63■□□□□ 0.57
POLR1DQ9Y2S0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1DQ9Y2S0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
POLR1DQ9Y2S0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1DQ9Y2S0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.63■□□□□ 0.57
POLR1DQ9Y2S0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.63■□□□□ 0.57
POLR1DQ9Y2S0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.63■□□□□ 0.57
POLR1DQ9Y2S0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.63■□□□□ 0.57
POLR1DQ9Y2S0 AL024507.2-201ENST00000606070 2574 ntBASIC18.63■□□□□ 0.57
POLR1DQ9Y2S0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
POLR1DQ9Y2S0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
POLR1DQ9Y2S0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1DQ9Y2S0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1DQ9Y2S0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1DQ9Y2S0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1DQ9Y2S0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms