Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPSF2Q9P2I0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.02■□□□□ 0.95
CPSF2Q9P2I0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 AC138932.1-201ENST00000534164 6830 ntBASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 AC011298.3-201ENST00000615796 283 ntBASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.01■□□□□ 0.95
CPSF2Q9P2I0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPSF2Q9P2I0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPSF2Q9P2I0 AP004607.7-201ENST00000527152 1677 ntBASIC21■□□□□ 0.95
CPSF2Q9P2I0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21■□□□□ 0.95
CPSF2Q9P2I0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21■□□□□ 0.95
CPSF2Q9P2I0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPSF2Q9P2I0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21■□□□□ 0.95
CPSF2Q9P2I0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CPSF2Q9P2I0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CPSF2Q9P2I0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CPSF2Q9P2I0 AC003102.1-202ENST00000563394 1796 ntBASIC21■□□□□ 0.95
CPSF2Q9P2I0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CPSF2Q9P2I0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CPSF2Q9P2I0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CPSF2Q9P2I0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPSF2Q9P2I0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPSF2Q9P2I0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.99■□□□□ 0.95
CPSF2Q9P2I0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CPSF2Q9P2I0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPSF2Q9P2I0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPSF2Q9P2I0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
CPSF2Q9P2I0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPSF2Q9P2I0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPSF2Q9P2I0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
CPSF2Q9P2I0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.98■□□□□ 0.95
CPSF2Q9P2I0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPSF2Q9P2I0 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.98■□□□□ 0.95
CPSF2Q9P2I0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.98■□□□□ 0.95
CPSF2Q9P2I0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.98■□□□□ 0.95
CPSF2Q9P2I0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPSF2Q9P2I0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPSF2Q9P2I0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.98■□□□□ 0.95
CPSF2Q9P2I0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPSF2Q9P2I0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.98■□□□□ 0.95
CPSF2Q9P2I0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CPSF2Q9P2I0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPSF2Q9P2I0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.97■□□□□ 0.95
CPSF2Q9P2I0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.97■□□□□ 0.95
CPSF2Q9P2I0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.97■□□□□ 0.95
CPSF2Q9P2I0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPSF2Q9P2I0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.97■□□□□ 0.95
CPSF2Q9P2I0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.97■□□□□ 0.95
CPSF2Q9P2I0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.97■□□□□ 0.95
CPSF2Q9P2I0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPSF2Q9P2I0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF2Q9P2I0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.96■□□□□ 0.95
CPSF2Q9P2I0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CPSF2Q9P2I0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CPSF2Q9P2I0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
CPSF2Q9P2I0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.96■□□□□ 0.95
CPSF2Q9P2I0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF2Q9P2I0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF2Q9P2I0 AL136116.3-201ENST00000402907 1138 ntBASIC20.96■□□□□ 0.95
CPSF2Q9P2I0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF2Q9P2I0 AP005435.1-201ENST00000529293 1178 ntBASIC20.96■□□□□ 0.95
CPSF2Q9P2I0 AL034346.1-201ENST00000568244 1277 ntBASIC20.96■□□□□ 0.95
CPSF2Q9P2I0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.96■□□□□ 0.95
CPSF2Q9P2I0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.96■□□□□ 0.95
CPSF2Q9P2I0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF2Q9P2I0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF2Q9P2I0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF2Q9P2I0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF2Q9P2I0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF2Q9P2I0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CPSF2Q9P2I0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CPSF2Q9P2I0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.95■□□□□ 0.94
CPSF2Q9P2I0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPSF2Q9P2I0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPSF2Q9P2I0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.95■□□□□ 0.94
CPSF2Q9P2I0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPSF2Q9P2I0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPSF2Q9P2I0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
CPSF2Q9P2I0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.95■□□□□ 0.94
CPSF2Q9P2I0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPSF2Q9P2I0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.95■□□□□ 0.94
CPSF2Q9P2I0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.95■□□□□ 0.94
CPSF2Q9P2I0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms