Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 GABARAPL3-202ENST00000624044 1851 ntBASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 AC116562.4-201ENST00000641316 2276 ntBASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE1Q9NRR8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE1Q9NRR8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms