Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AC010141.2-201ENST00000452426 721 ntBASIC19.29■□□□□ 0.68
UBQLN4Q9NRR5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.29■□□□□ 0.68
UBQLN4Q9NRR5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.29■□□□□ 0.68
UBQLN4Q9NRR5 AC087623.3-201ENST00000607047 1098 ntBASIC19.29■□□□□ 0.68
UBQLN4Q9NRR5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
UBQLN4Q9NRR5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBQLN4Q9NRR5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBQLN4Q9NRR5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBQLN4Q9NRR5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBQLN4Q9NRR5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.29■□□□□ 0.68
UBQLN4Q9NRR5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBQLN4Q9NRR5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 KRT19P1-201ENST00000405746 1186 ntBASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 RARRES2P6-201ENST00000567333 442 ntBASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 AP001160.3-201ENST00000601484 763 ntBASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
UBQLN4Q9NRR5 AC061975.6-201ENST00000579045 1553 ntBASIC19.27■□□□□ 0.68
UBQLN4Q9NRR5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN4Q9NRR5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.27■□□□□ 0.68
UBQLN4Q9NRR5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.27■□□□□ 0.68
UBQLN4Q9NRR5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN4Q9NRR5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
UBQLN4Q9NRR5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.27■□□□□ 0.68
UBQLN4Q9NRR5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN4Q9NRR5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN4Q9NRR5 AC026271.2-201ENST00000428091 497 ntBASIC19.27■□□□□ 0.68
UBQLN4Q9NRR5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.27■□□□□ 0.68
UBQLN4Q9NRR5 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
UBQLN4Q9NRR5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.27■□□□□ 0.68
UBQLN4Q9NRR5 AC120498.10-201ENST00000621827 505 ntBASIC19.27■□□□□ 0.68
UBQLN4Q9NRR5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
UBQLN4Q9NRR5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
UBQLN4Q9NRR5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
UBQLN4Q9NRR5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
UBQLN4Q9NRR5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBQLN4Q9NRR5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
UBQLN4Q9NRR5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.27■□□□□ 0.67
UBQLN4Q9NRR5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBQLN4Q9NRR5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 NTF6G-201ENST00000591094 616 ntBASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN4Q9NRR5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN4Q9NRR5 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN4Q9NRR5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN4Q9NRR5 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
UBQLN4Q9NRR5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.25■□□□□ 0.67
UBQLN4Q9NRR5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN4Q9NRR5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN4Q9NRR5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
UBQLN4Q9NRR5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN4Q9NRR5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN4Q9NRR5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN4Q9NRR5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN4Q9NRR5 AL049796.1-201ENST00000565336 1766 ntBASIC19.24■□□□□ 0.67
UBQLN4Q9NRR5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.24■□□□□ 0.67
UBQLN4Q9NRR5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.24■□□□□ 0.67
UBQLN4Q9NRR5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
UBQLN4Q9NRR5 KRT18P20-201ENST00000548986 1279 ntBASIC19.24■□□□□ 0.67
UBQLN4Q9NRR5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN4Q9NRR5 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
UBQLN4Q9NRR5 AL137060.1-201ENST00000618151 2648 ntBASIC19.24■□□□□ 0.67
UBQLN4Q9NRR5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.24■□□□□ 0.67
UBQLN4Q9NRR5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.24■□□□□ 0.67
UBQLN4Q9NRR5 KRT16P2-201ENST00000414673 1423 ntBASIC19.24■□□□□ 0.67
UBQLN4Q9NRR5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
UBQLN4Q9NRR5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms