Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC14.42□□□□□ -0.1
CDC42SE2Q9NRR3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 SMUG1P1-201ENST00000590640 811 ntBASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 MIR4466-201ENST00000606121 54 ntBASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 AP005212.1-201ENST00000581547 1997 ntBASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 AC092667.1-201ENST00000434301 2586 ntBASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC42SE2Q9NRR3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CDC42SE2Q9NRR3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CDC42SE2Q9NRR3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 AC121338.2-201ENST00000622535 1744 ntBASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.39□□□□□ -0.11
CDC42SE2Q9NRR3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 AC073314.1-201ENST00000568729 2216 ntBASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms