Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 AC010525.1-201ENST00000585559 441 ntBASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHB16Q9NRJ7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB16Q9NRJ7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB16Q9NRJ7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHB16Q9NRJ7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB16Q9NRJ7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB16Q9NRJ7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB16Q9NRJ7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
PCDHB16Q9NRJ7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHB16Q9NRJ7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB16Q9NRJ7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHB16Q9NRJ7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHB16Q9NRJ7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB16Q9NRJ7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB16Q9NRJ7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB16Q9NRJ7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB16Q9NRJ7 AC005229.4-201ENST00000610085 2198 ntBASIC18.1■□□□□ 0.49
PCDHB16Q9NRJ7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB16Q9NRJ7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHB16Q9NRJ7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB16Q9NRJ7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB16Q9NRJ7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB16Q9NRJ7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB16Q9NRJ7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB16Q9NRJ7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB16Q9NRJ7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB16Q9NRJ7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB16Q9NRJ7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.09■□□□□ 0.49
PCDHB16Q9NRJ7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB16Q9NRJ7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB16Q9NRJ7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB16Q9NRJ7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHB16Q9NRJ7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB16Q9NRJ7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB16Q9NRJ7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHB16Q9NRJ7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB16Q9NRJ7 AC008406.3-201ENST00000620001 1374 ntBASIC18.08■□□□□ 0.49
PCDHB16Q9NRJ7 AC026471.6-201ENST00000622954 1905 ntBASIC18.08■□□□□ 0.49
PCDHB16Q9NRJ7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PCDHB16Q9NRJ7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB16Q9NRJ7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 AC131281.2-201ENST00000520478 145 ntBASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHB16Q9NRJ7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB16Q9NRJ7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB16Q9NRJ7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB16Q9NRJ7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB16Q9NRJ7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHB16Q9NRJ7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB16Q9NRJ7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB16Q9NRJ7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB16Q9NRJ7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHB16Q9NRJ7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB16Q9NRJ7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB16Q9NRJ7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB16Q9NRJ7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHB16Q9NRJ7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB16Q9NRJ7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB16Q9NRJ7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB16Q9NRJ7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms