Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTPS2Q9NRF8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CTPS2Q9NRF8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTPS2Q9NRF8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTPS2Q9NRF8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTPS2Q9NRF8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTPS2Q9NRF8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTPS2Q9NRF8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTPS2Q9NRF8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CTPS2Q9NRF8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTPS2Q9NRF8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTPS2Q9NRF8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTPS2Q9NRF8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTPS2Q9NRF8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.44■□□□□ 0.7
CTPS2Q9NRF8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTPS2Q9NRF8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.44■□□□□ 0.7
CTPS2Q9NRF8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
CTPS2Q9NRF8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTPS2Q9NRF8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.44■□□□□ 0.7
CTPS2Q9NRF8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTPS2Q9NRF8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTPS2Q9NRF8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTPS2Q9NRF8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTPS2Q9NRF8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CTPS2Q9NRF8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTPS2Q9NRF8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.43■□□□□ 0.7
CTPS2Q9NRF8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTPS2Q9NRF8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CTPS2Q9NRF8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTPS2Q9NRF8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTPS2Q9NRF8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.42■□□□□ 0.7
CTPS2Q9NRF8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CTPS2Q9NRF8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.42■□□□□ 0.7
CTPS2Q9NRF8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTPS2Q9NRF8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTPS2Q9NRF8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.42■□□□□ 0.7
CTPS2Q9NRF8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTPS2Q9NRF8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CTPS2Q9NRF8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.42■□□□□ 0.7
CTPS2Q9NRF8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.42■□□□□ 0.7
CTPS2Q9NRF8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CTPS2Q9NRF8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CTPS2Q9NRF8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTPS2Q9NRF8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 IRS3P-201ENST00000223076 1006 ntBASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 AC012414.1-201ENST00000556676 535 ntBASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
CTPS2Q9NRF8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 BX005040.4-201ENST00000637145 1518 ntBASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTPS2Q9NRF8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTPS2Q9NRF8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CTPS2Q9NRF8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTPS2Q9NRF8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CTPS2Q9NRF8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CTPS2Q9NRF8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.39■□□□□ 0.7
CTPS2Q9NRF8 AC073130.3-201ENST00000624389 2278 ntBASIC19.39■□□□□ 0.69
CTPS2Q9NRF8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.39■□□□□ 0.69
CTPS2Q9NRF8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms