Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KCNMB3Q9NPA1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KCNMB3Q9NPA1 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.65■■□□□ 1.38
KCNMB3Q9NPA1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KCNMB3Q9NPA1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KCNMB3Q9NPA1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KCNMB3Q9NPA1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.65■■□□□ 1.38
KCNMB3Q9NPA1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KCNMB3Q9NPA1 AC011767.1-201ENST00000617410 1153 ntBASIC23.65■■□□□ 1.38
KCNMB3Q9NPA1 BID-214ENST00000617586 542 ntTSL 5 BASIC23.65■■□□□ 1.38
KCNMB3Q9NPA1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KCNMB3Q9NPA1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KCNMB3Q9NPA1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KCNMB3Q9NPA1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
KCNMB3Q9NPA1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
KCNMB3Q9NPA1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
KCNMB3Q9NPA1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
KCNMB3Q9NPA1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
KCNMB3Q9NPA1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
KCNMB3Q9NPA1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.64■■□□□ 1.38
KCNMB3Q9NPA1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.64■■□□□ 1.38
KCNMB3Q9NPA1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
KCNMB3Q9NPA1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.64■■□□□ 1.37
KCNMB3Q9NPA1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.64■■□□□ 1.37
KCNMB3Q9NPA1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.64■■□□□ 1.37
KCNMB3Q9NPA1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KCNMB3Q9NPA1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
KCNMB3Q9NPA1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
KCNMB3Q9NPA1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.64■■□□□ 1.37
KCNMB3Q9NPA1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KCNMB3Q9NPA1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.64■■□□□ 1.37
KCNMB3Q9NPA1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.63■■□□□ 1.37
KCNMB3Q9NPA1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.62■■□□□ 1.37
KCNMB3Q9NPA1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
KCNMB3Q9NPA1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
KCNMB3Q9NPA1 DUX4L16-201ENST00000555130 1264 ntBASIC23.62■■□□□ 1.37
KCNMB3Q9NPA1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.62■■□□□ 1.37
KCNMB3Q9NPA1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KCNMB3Q9NPA1 AC010536.3-201ENST00000620306 533 ntBASIC23.62■■□□□ 1.37
KCNMB3Q9NPA1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
KCNMB3Q9NPA1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KCNMB3Q9NPA1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.62■■□□□ 1.37
KCNMB3Q9NPA1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KCNMB3Q9NPA1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KCNMB3Q9NPA1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KCNMB3Q9NPA1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KCNMB3Q9NPA1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KCNMB3Q9NPA1 RBM17P2-201ENST00000616397 1405 ntBASIC23.61■■□□□ 1.37
KCNMB3Q9NPA1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
KCNMB3Q9NPA1 AC026310.3-201ENST00000625186 2373 ntBASIC23.61■■□□□ 1.37
KCNMB3Q9NPA1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KCNMB3Q9NPA1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KCNMB3Q9NPA1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.61■■□□□ 1.37
KCNMB3Q9NPA1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.61■■□□□ 1.37
KCNMB3Q9NPA1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
KCNMB3Q9NPA1 AC243732.1-201ENST00000612648 864 ntBASIC23.61■■□□□ 1.37
KCNMB3Q9NPA1 RARRES2P11-201ENST00000635158 484 ntBASIC23.61■■□□□ 1.37
KCNMB3Q9NPA1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
KCNMB3Q9NPA1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.61■■□□□ 1.37
KCNMB3Q9NPA1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNMB3Q9NPA1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.6■■□□□ 1.37
KCNMB3Q9NPA1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
KCNMB3Q9NPA1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.6■■□□□ 1.37
KCNMB3Q9NPA1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.6■■□□□ 1.37
KCNMB3Q9NPA1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.6■■□□□ 1.37
KCNMB3Q9NPA1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.6■■□□□ 1.37
KCNMB3Q9NPA1 RAP2CP1-201ENST00000605103 478 ntBASIC23.6■■□□□ 1.37
KCNMB3Q9NPA1 AC080038.1-201ENST00000611274 1154 ntBASIC23.6■■□□□ 1.37
KCNMB3Q9NPA1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
KCNMB3Q9NPA1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.6■■□□□ 1.37
KCNMB3Q9NPA1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNMB3Q9NPA1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.59■■□□□ 1.37
KCNMB3Q9NPA1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.59■■□□□ 1.37
KCNMB3Q9NPA1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
KCNMB3Q9NPA1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
KCNMB3Q9NPA1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KCNMB3Q9NPA1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
KCNMB3Q9NPA1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
KCNMB3Q9NPA1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms