Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRM3Q9HC36 LINC02228-203ENST00000641970 1355 ntBASIC20.97■□□□□ 0.95
MRM3Q9HC36 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRM3Q9HC36 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.97■□□□□ 0.95
MRM3Q9HC36 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.97■□□□□ 0.95
MRM3Q9HC36 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
MRM3Q9HC36 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRM3Q9HC36 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRM3Q9HC36 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRM3Q9HC36 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
MRM3Q9HC36 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRM3Q9HC36 POU5F1P4-201ENST00000413175 1085 ntBASIC20.97■□□□□ 0.95
MRM3Q9HC36 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.97■□□□□ 0.95
MRM3Q9HC36 AC123595.1-201ENST00000440769 1046 ntBASIC20.97■□□□□ 0.95
MRM3Q9HC36 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRM3Q9HC36 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRM3Q9HC36 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MRM3Q9HC36 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRM3Q9HC36 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRM3Q9HC36 AC061975.6-201ENST00000579045 1553 ntBASIC20.97■□□□□ 0.95
MRM3Q9HC36 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.97■□□□□ 0.95
MRM3Q9HC36 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRM3Q9HC36 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRM3Q9HC36 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.96■□□□□ 0.95
MRM3Q9HC36 RARRES2P6-201ENST00000567333 442 ntBASIC20.96■□□□□ 0.95
MRM3Q9HC36 AC138907.5-202ENST00000569484 235 ntBASIC20.96■□□□□ 0.95
MRM3Q9HC36 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.96■□□□□ 0.95
MRM3Q9HC36 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
MRM3Q9HC36 AC008175.2-201ENST00000612840 297 ntBASIC20.96■□□□□ 0.95
MRM3Q9HC36 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
MRM3Q9HC36 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.96■□□□□ 0.95
MRM3Q9HC36 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MRM3Q9HC36 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRM3Q9HC36 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
MRM3Q9HC36 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.96■□□□□ 0.95
MRM3Q9HC36 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.95■□□□□ 0.94
MRM3Q9HC36 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.95■□□□□ 0.94
MRM3Q9HC36 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MRM3Q9HC36 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
MRM3Q9HC36 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MRM3Q9HC36 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MRM3Q9HC36 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
MRM3Q9HC36 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
MRM3Q9HC36 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MRM3Q9HC36 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRM3Q9HC36 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRM3Q9HC36 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRM3Q9HC36 AC006128.1-201ENST00000624704 1661 ntBASIC20.95■□□□□ 0.94
MRM3Q9HC36 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRM3Q9HC36 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MRM3Q9HC36 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MRM3Q9HC36 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MRM3Q9HC36 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
MRM3Q9HC36 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.94■□□□□ 0.94
MRM3Q9HC36 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.94■□□□□ 0.94
MRM3Q9HC36 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MRM3Q9HC36 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MRM3Q9HC36 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MRM3Q9HC36 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MRM3Q9HC36 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.94■□□□□ 0.94
MRM3Q9HC36 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRM3Q9HC36 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRM3Q9HC36 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MRM3Q9HC36 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MRM3Q9HC36 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MRM3Q9HC36 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
MRM3Q9HC36 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRM3Q9HC36 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRM3Q9HC36 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.93■□□□□ 0.94
MRM3Q9HC36 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.93■□□□□ 0.94
MRM3Q9HC36 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.93■□□□□ 0.94
MRM3Q9HC36 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.93■□□□□ 0.94
MRM3Q9HC36 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.93■□□□□ 0.94
MRM3Q9HC36 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MRM3Q9HC36 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
MRM3Q9HC36 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRM3Q9HC36 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRM3Q9HC36 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.93■□□□□ 0.94
MRM3Q9HC36 AC121338.2-201ENST00000622535 1744 ntBASIC20.92■□□□□ 0.94
MRM3Q9HC36 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MRM3Q9HC36 PLK5-205ENST00000642079 1969 ntBASIC20.92■□□□□ 0.94
MRM3Q9HC36 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MRM3Q9HC36 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MRM3Q9HC36 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MRM3Q9HC36 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.92■□□□□ 0.94
MRM3Q9HC36 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MRM3Q9HC36 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MRM3Q9HC36 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MRM3Q9HC36 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MRM3Q9HC36 YBX1P1-201ENST00000445822 960 ntBASIC20.92■□□□□ 0.94
MRM3Q9HC36 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.92■□□□□ 0.94
MRM3Q9HC36 TERF1P2-201ENST00000583350 1212 ntBASIC20.92■□□□□ 0.94
MRM3Q9HC36 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MRM3Q9HC36 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MRM3Q9HC36 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MRM3Q9HC36 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MRM3Q9HC36 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MRM3Q9HC36 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MRM3Q9HC36 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
MRM3Q9HC36 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms