Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TREX2Q9BQ50 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TREX2Q9BQ50 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TREX2Q9BQ50 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.66■□□□□ 0.74
TREX2Q9BQ50 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TREX2Q9BQ50 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.65■□□□□ 0.74
TREX2Q9BQ50 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TREX2Q9BQ50 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.65■□□□□ 0.74
TREX2Q9BQ50 TERF1P2-201ENST00000583350 1212 ntBASIC19.65■□□□□ 0.74
TREX2Q9BQ50 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TREX2Q9BQ50 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TREX2Q9BQ50 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TREX2Q9BQ50 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TREX2Q9BQ50 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TREX2Q9BQ50 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TREX2Q9BQ50 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TREX2Q9BQ50 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.65■□□□□ 0.74
TREX2Q9BQ50 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TREX2Q9BQ50 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TREX2Q9BQ50 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TREX2Q9BQ50 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TREX2Q9BQ50 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TREX2Q9BQ50 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TREX2Q9BQ50 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.64■□□□□ 0.74
TREX2Q9BQ50 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.64■□□□□ 0.73
TREX2Q9BQ50 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TREX2Q9BQ50 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.64■□□□□ 0.73
TREX2Q9BQ50 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.64■□□□□ 0.73
TREX2Q9BQ50 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.64■□□□□ 0.73
TREX2Q9BQ50 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TREX2Q9BQ50 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.64■□□□□ 0.73
TREX2Q9BQ50 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.64■□□□□ 0.73
TREX2Q9BQ50 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.64■□□□□ 0.73
TREX2Q9BQ50 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.64■□□□□ 0.73
TREX2Q9BQ50 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TREX2Q9BQ50 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TREX2Q9BQ50 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.64■□□□□ 0.73
TREX2Q9BQ50 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TREX2Q9BQ50 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TREX2Q9BQ50 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TREX2Q9BQ50 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.64■□□□□ 0.73
TREX2Q9BQ50 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
TREX2Q9BQ50 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TREX2Q9BQ50 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TREX2Q9BQ50 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.63■□□□□ 0.73
TREX2Q9BQ50 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TREX2Q9BQ50 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.63■□□□□ 0.73
TREX2Q9BQ50 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TREX2Q9BQ50 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.63■□□□□ 0.73
TREX2Q9BQ50 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TREX2Q9BQ50 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.63■□□□□ 0.73
TREX2Q9BQ50 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.63■□□□□ 0.73
TREX2Q9BQ50 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TREX2Q9BQ50 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TREX2Q9BQ50 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 AL049796.1-201ENST00000565336 1766 ntBASIC19.62■□□□□ 0.73
TREX2Q9BQ50 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 AC009237.3-201ENST00000393279 1427 ntBASIC19.62■□□□□ 0.73
TREX2Q9BQ50 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 NTF6G-201ENST00000591094 616 ntBASIC19.62■□□□□ 0.73
TREX2Q9BQ50 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TREX2Q9BQ50 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TREX2Q9BQ50 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TREX2Q9BQ50 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.61■□□□□ 0.73
TREX2Q9BQ50 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TREX2Q9BQ50 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TREX2Q9BQ50 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TREX2Q9BQ50 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.61■□□□□ 0.73
TREX2Q9BQ50 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.61■□□□□ 0.73
TREX2Q9BQ50 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TREX2Q9BQ50 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TREX2Q9BQ50 MIR6084-201ENST00000622012 110 ntBASIC19.61■□□□□ 0.73
TREX2Q9BQ50 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.61■□□□□ 0.73
TREX2Q9BQ50 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TREX2Q9BQ50 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TREX2Q9BQ50 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TREX2Q9BQ50 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms