Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF5Q99942 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RNF5Q99942 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF5Q99942 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RNF5Q99942 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF5Q99942 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
RNF5Q99942 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF5Q99942 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF5Q99942 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF5Q99942 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.76■□□□□ 0.27
RNF5Q99942 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF5Q99942 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF5Q99942 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF5Q99942 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF5Q99942 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RNF5Q99942 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF5Q99942 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RNF5Q99942 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF5Q99942 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF5Q99942 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF5Q99942 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF5Q99942 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF5Q99942 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF5Q99942 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF5Q99942 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF5Q99942 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF5Q99942 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF5Q99942 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.75■□□□□ 0.27
RNF5Q99942 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF5Q99942 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.75■□□□□ 0.27
RNF5Q99942 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF5Q99942 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF5Q99942 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RNF5Q99942 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF5Q99942 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF5Q99942 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF5Q99942 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF5Q99942 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF5Q99942 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF5Q99942 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
RNF5Q99942 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF5Q99942 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RNF5Q99942 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF5Q99942 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF5Q99942 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF5Q99942 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF5Q99942 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RNF5Q99942 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF5Q99942 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF5Q99942 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF5Q99942 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF5Q99942 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF5Q99942 AC061975.6-201ENST00000579045 1553 ntBASIC16.73■□□□□ 0.27
RNF5Q99942 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF5Q99942 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF5Q99942 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF5Q99942 KRT19P1-201ENST00000405746 1186 ntBASIC16.73■□□□□ 0.27
RNF5Q99942 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.73■□□□□ 0.27
RNF5Q99942 AP001160.3-201ENST00000601484 763 ntBASIC16.73■□□□□ 0.27
RNF5Q99942 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF5Q99942 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF5Q99942 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF5Q99942 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RNF5Q99942 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
RNF5Q99942 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF5Q99942 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RNF5Q99942 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
RNF5Q99942 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF5Q99942 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF5Q99942 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF5Q99942 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RNF5Q99942 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF5Q99942 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF5Q99942 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
RNF5Q99942 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF5Q99942 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF5Q99942 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
RNF5Q99942 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF5Q99942 AC097381.1-201ENST00000429019 1296 ntBASIC16.72■□□□□ 0.27
RNF5Q99942 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF5Q99942 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF5Q99942 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF5Q99942 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF5Q99942 SLC7A5P1-201ENST00000568957 537 ntBASIC16.72■□□□□ 0.27
RNF5Q99942 AC104187.1-201ENST00000607510 612 ntBASIC16.72■□□□□ 0.27
RNF5Q99942 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RNF5Q99942 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RNF5Q99942 AC005229.4-201ENST00000610085 2198 ntBASIC16.72■□□□□ 0.27
RNF5Q99942 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF5Q99942 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF5Q99942 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF5Q99942 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF5Q99942 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF5Q99942 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF5Q99942 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF5Q99942 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF5Q99942 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF5Q99942 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF5Q99942 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF5Q99942 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms