Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE1Q99829 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE1Q99829 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE1Q99829 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE1Q99829 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE1Q99829 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE1Q99829 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CPNE1Q99829 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE1Q99829 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.95■□□□□ 0.94
CPNE1Q99829 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.95■□□□□ 0.94
CPNE1Q99829 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CPNE1Q99829 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE1Q99829 TSPY26P-201ENST00000476365 1326 ntBASIC20.95■□□□□ 0.94
CPNE1Q99829 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE1Q99829 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.95■□□□□ 0.94
CPNE1Q99829 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE1Q99829 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE1Q99829 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE1Q99829 PLK5-205ENST00000642079 1969 ntBASIC20.94■□□□□ 0.94
CPNE1Q99829 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE1Q99829 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CPNE1Q99829 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CPNE1Q99829 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.94■□□□□ 0.94
CPNE1Q99829 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE1Q99829 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.94■□□□□ 0.94
CPNE1Q99829 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.94■□□□□ 0.94
CPNE1Q99829 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.94■□□□□ 0.94
CPNE1Q99829 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CPNE1Q99829 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE1Q99829 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CPNE1Q99829 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.94■□□□□ 0.94
CPNE1Q99829 BX005040.4-201ENST00000637145 1518 ntBASIC20.94■□□□□ 0.94
CPNE1Q99829 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.93■□□□□ 0.94
CPNE1Q99829 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE1Q99829 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE1Q99829 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE1Q99829 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE1Q99829 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE1Q99829 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CPNE1Q99829 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CPNE1Q99829 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE1Q99829 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.93■□□□□ 0.94
CPNE1Q99829 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE1Q99829 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.93■□□□□ 0.94
CPNE1Q99829 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.93■□□□□ 0.94
CPNE1Q99829 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.92■□□□□ 0.94
CPNE1Q99829 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CPNE1Q99829 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE1Q99829 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE1Q99829 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE1Q99829 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CPNE1Q99829 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.92■□□□□ 0.94
CPNE1Q99829 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.92■□□□□ 0.94
CPNE1Q99829 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE1Q99829 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.92■□□□□ 0.94
CPNE1Q99829 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.92■□□□□ 0.94
CPNE1Q99829 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.92■□□□□ 0.94
CPNE1Q99829 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.92■□□□□ 0.94
CPNE1Q99829 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
CPNE1Q99829 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.92■□□□□ 0.94
CPNE1Q99829 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE1Q99829 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE1Q99829 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE1Q99829 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE1Q99829 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE1Q99829 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE1Q99829 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE1Q99829 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE1Q99829 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE1Q99829 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE1Q99829 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE1Q99829 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
CPNE1Q99829 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.91■□□□□ 0.94
CPNE1Q99829 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.91■□□□□ 0.94
CPNE1Q99829 AC096631.2-201ENST00000436136 790 ntBASIC20.91■□□□□ 0.94
CPNE1Q99829 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.91■□□□□ 0.94
CPNE1Q99829 PBX2P1-201ENST00000493219 1291 ntBASIC20.91■□□□□ 0.94
CPNE1Q99829 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.91■□□□□ 0.94
CPNE1Q99829 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.91■□□□□ 0.94
CPNE1Q99829 AC008406.3-201ENST00000620001 1374 ntBASIC20.91■□□□□ 0.94
CPNE1Q99829 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.91■□□□□ 0.94
CPNE1Q99829 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
CPNE1Q99829 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CPNE1Q99829 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE1Q99829 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CPNE1Q99829 EDA-201ENST00000338901 1233 ntBASIC20.9■□□□□ 0.94
CPNE1Q99829 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE1Q99829 AP001330.3-201ENST00000520123 633 ntBASIC20.9■□□□□ 0.94
CPNE1Q99829 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.9■□□□□ 0.94
CPNE1Q99829 AC106739.1-201ENST00000617035 715 ntBASIC20.9■□□□□ 0.94
CPNE1Q99829 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CPNE1Q99829 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE1Q99829 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.9■□□□□ 0.94
CPNE1Q99829 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE1Q99829 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE1Q99829 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE1Q99829 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE1Q99829 AC121338.2-201ENST00000622535 1744 ntBASIC20.9■□□□□ 0.94
CPNE1Q99829 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.89■□□□□ 0.94
CPNE1Q99829 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms