Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GFI1Q99684 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GFI1Q99684 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GFI1Q99684 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.11■□□□□ 0.49
GFI1Q99684 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GFI1Q99684 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GFI1Q99684 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
GFI1Q99684 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GFI1Q99684 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GFI1Q99684 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GFI1Q99684 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.11■□□□□ 0.49
GFI1Q99684 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
GFI1Q99684 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GFI1Q99684 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GFI1Q99684 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GFI1Q99684 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GFI1Q99684 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.1■□□□□ 0.49
GFI1Q99684 AL512408.1-201ENST00000569378 2000 ntBASIC18.1■□□□□ 0.49
GFI1Q99684 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.1■□□□□ 0.49
GFI1Q99684 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GFI1Q99684 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GFI1Q99684 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GFI1Q99684 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GFI1Q99684 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GFI1Q99684 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
GFI1Q99684 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GFI1Q99684 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.1■□□□□ 0.49
GFI1Q99684 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
GFI1Q99684 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.1■□□□□ 0.49
GFI1Q99684 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GFI1Q99684 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GFI1Q99684 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.1■□□□□ 0.49
GFI1Q99684 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.09■□□□□ 0.49
GFI1Q99684 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GFI1Q99684 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
GFI1Q99684 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GFI1Q99684 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GFI1Q99684 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GFI1Q99684 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GFI1Q99684 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GFI1Q99684 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GFI1Q99684 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GFI1Q99684 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GFI1Q99684 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GFI1Q99684 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GFI1Q99684 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GFI1Q99684 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
GFI1Q99684 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GFI1Q99684 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.09■□□□□ 0.49
GFI1Q99684 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.09■□□□□ 0.49
GFI1Q99684 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GFI1Q99684 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.09■□□□□ 0.49
GFI1Q99684 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.09■□□□□ 0.49
GFI1Q99684 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GFI1Q99684 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.09■□□□□ 0.49
GFI1Q99684 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
GFI1Q99684 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GFI1Q99684 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GFI1Q99684 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GFI1Q99684 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GFI1Q99684 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
GFI1Q99684 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GFI1Q99684 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GFI1Q99684 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
GFI1Q99684 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GFI1Q99684 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
GFI1Q99684 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
GFI1Q99684 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GFI1Q99684 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.08■□□□□ 0.48
GFI1Q99684 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.08■□□□□ 0.48
GFI1Q99684 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.08■□□□□ 0.48
GFI1Q99684 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.08■□□□□ 0.48
GFI1Q99684 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.08■□□□□ 0.48
GFI1Q99684 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.08■□□□□ 0.48
GFI1Q99684 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GFI1Q99684 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.08■□□□□ 0.48
GFI1Q99684 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GFI1Q99684 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GFI1Q99684 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.08■□□□□ 0.48
GFI1Q99684 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
GFI1Q99684 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GFI1Q99684 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GFI1Q99684 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.07■□□□□ 0.48
GFI1Q99684 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GFI1Q99684 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.07■□□□□ 0.48
GFI1Q99684 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GFI1Q99684 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.07■□□□□ 0.48
GFI1Q99684 KRT16P3-201ENST00000439127 1283 ntBASIC18.07■□□□□ 0.48
GFI1Q99684 AP005435.1-201ENST00000529293 1178 ntBASIC18.07■□□□□ 0.48
GFI1Q99684 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
GFI1Q99684 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GFI1Q99684 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GFI1Q99684 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.07■□□□□ 0.48
GFI1Q99684 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GFI1Q99684 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
GFI1Q99684 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
GFI1Q99684 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GFI1Q99684 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.06■□□□□ 0.48
GFI1Q99684 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.06■□□□□ 0.48
GFI1Q99684 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms