Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF2Q99496 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
RNF2Q99496 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
RNF2Q99496 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF2Q99496 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF2Q99496 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF2Q99496 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
RNF2Q99496 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF2Q99496 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RNF2Q99496 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF2Q99496 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF2Q99496 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF2Q99496 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF2Q99496 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF2Q99496 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF2Q99496 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF2Q99496 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF2Q99496 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF2Q99496 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF2Q99496 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF2Q99496 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
RNF2Q99496 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF2Q99496 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF2Q99496 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF2Q99496 PBX2P1-201ENST00000493219 1291 ntBASIC16.59■□□□□ 0.25
RNF2Q99496 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF2Q99496 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF2Q99496 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF2Q99496 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF2Q99496 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF2Q99496 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF2Q99496 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF2Q99496 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF2Q99496 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF2Q99496 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RNF2Q99496 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF2Q99496 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF2Q99496 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF2Q99496 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF2Q99496 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF2Q99496 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF2Q99496 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF2Q99496 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF2Q99496 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF2Q99496 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF2Q99496 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF2Q99496 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RNF2Q99496 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF2Q99496 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF2Q99496 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
RNF2Q99496 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RNF2Q99496 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF2Q99496 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF2Q99496 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF2Q99496 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF2Q99496 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF2Q99496 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF2Q99496 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RNF2Q99496 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF2Q99496 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF2Q99496 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF2Q99496 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF2Q99496 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RNF2Q99496 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF2Q99496 SLC47A1P1-202ENST00000449666 945 ntBASIC16.57■□□□□ 0.24
RNF2Q99496 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF2Q99496 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF2Q99496 AC110285.6-201ENST00000617652 491 ntBASIC16.57■□□□□ 0.24
RNF2Q99496 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF2Q99496 AC087239.1-201ENST00000622671 572 ntBASIC16.57■□□□□ 0.24
RNF2Q99496 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF2Q99496 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF2Q99496 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF2Q99496 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RNF2Q99496 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.57■□□□□ 0.24
RNF2Q99496 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF2Q99496 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF2Q99496 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF2Q99496 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF2Q99496 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF2Q99496 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF2Q99496 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF2Q99496 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RNF2Q99496 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF2Q99496 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF2Q99496 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
RNF2Q99496 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF2Q99496 AL034346.1-201ENST00000568244 1277 ntBASIC16.56■□□□□ 0.24
RNF2Q99496 AC106739.1-201ENST00000617035 715 ntBASIC16.56■□□□□ 0.24
RNF2Q99496 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF2Q99496 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF2Q99496 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF2Q99496 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF2Q99496 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF2Q99496 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF2Q99496 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF2Q99496 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF2Q99496 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF2Q99496 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF2Q99496 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms