Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CFAP54Q96N23 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP54Q96N23 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.75■□□□□ 0.91
CFAP54Q96N23 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP54Q96N23 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CFAP54Q96N23 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.75■□□□□ 0.91
CFAP54Q96N23 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP54Q96N23 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.75■□□□□ 0.91
CFAP54Q96N23 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CFAP54Q96N23 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP54Q96N23 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.75■□□□□ 0.91
CFAP54Q96N23 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.75■□□□□ 0.91
CFAP54Q96N23 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
CFAP54Q96N23 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.75■□□□□ 0.91
CFAP54Q96N23 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.75■□□□□ 0.91
CFAP54Q96N23 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP54Q96N23 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CFAP54Q96N23 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
CFAP54Q96N23 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP54Q96N23 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP54Q96N23 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CFAP54Q96N23 LINC00543-201ENST00000567234 1845 ntBASIC20.74■□□□□ 0.91
CFAP54Q96N23 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CFAP54Q96N23 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP54Q96N23 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.74■□□□□ 0.91
CFAP54Q96N23 AC092368.3-202ENST00000574180 1591 ntBASIC20.74■□□□□ 0.91
CFAP54Q96N23 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CFAP54Q96N23 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP54Q96N23 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP54Q96N23 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP54Q96N23 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP54Q96N23 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP54Q96N23 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP54Q96N23 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP54Q96N23 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP54Q96N23 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
CFAP54Q96N23 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP54Q96N23 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP54Q96N23 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP54Q96N23 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.73■□□□□ 0.91
CFAP54Q96N23 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.73■□□□□ 0.91
CFAP54Q96N23 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.73■□□□□ 0.91
CFAP54Q96N23 MTDHP1-201ENST00000605323 784 ntBASIC20.73■□□□□ 0.91
CFAP54Q96N23 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP54Q96N23 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.73■□□□□ 0.91
CFAP54Q96N23 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
CFAP54Q96N23 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.72■□□□□ 0.91
CFAP54Q96N23 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.72■□□□□ 0.91
CFAP54Q96N23 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CFAP54Q96N23 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.72■□□□□ 0.91
CFAP54Q96N23 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CFAP54Q96N23 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
CFAP54Q96N23 AC005521.1-201ENST00000393351 872 ntBASIC20.72■□□□□ 0.91
CFAP54Q96N23 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CFAP54Q96N23 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.72■□□□□ 0.91
CFAP54Q96N23 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CFAP54Q96N23 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CFAP54Q96N23 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.72■□□□□ 0.91
CFAP54Q96N23 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.72■□□□□ 0.91
CFAP54Q96N23 AL591742.1-201ENST00000604433 565 ntBASIC20.72■□□□□ 0.91
CFAP54Q96N23 AC124016.1-201ENST00000609552 612 ntBASIC20.72■□□□□ 0.91
CFAP54Q96N23 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.71■□□□□ 0.91
CFAP54Q96N23 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP54Q96N23 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP54Q96N23 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP54Q96N23 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP54Q96N23 CRYGFP-201ENST00000418459 633 ntBASIC20.71■□□□□ 0.91
CFAP54Q96N23 DUSP5P1-201ENST00000441325 1139 ntBASIC20.71■□□□□ 0.91
CFAP54Q96N23 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.71■□□□□ 0.91
CFAP54Q96N23 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP54Q96N23 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP54Q96N23 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP54Q96N23 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP54Q96N23 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.71■□□□□ 0.91
CFAP54Q96N23 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP54Q96N23 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.71■□□□□ 0.91
CFAP54Q96N23 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP54Q96N23 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CFAP54Q96N23 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP54Q96N23 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP54Q96N23 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
CFAP54Q96N23 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP54Q96N23 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP54Q96N23 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.7■□□□□ 0.9
CFAP54Q96N23 AC073508.3-201ENST00000619697 1419 ntBASIC20.7■□□□□ 0.9
CFAP54Q96N23 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CFAP54Q96N23 AP003733.4-201ENST00000623785 1697 ntBASIC20.7■□□□□ 0.9
CFAP54Q96N23 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP54Q96N23 LSM12P1-201ENST00000411836 588 ntBASIC20.69■□□□□ 0.9
CFAP54Q96N23 AL355472.2-201ENST00000422958 438 ntBASIC20.69■□□□□ 0.9
CFAP54Q96N23 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.69■□□□□ 0.9
CFAP54Q96N23 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP54Q96N23 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.69■□□□□ 0.9
CFAP54Q96N23 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP54Q96N23 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.69■□□□□ 0.9
CFAP54Q96N23 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CFAP54Q96N23 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.69■□□□□ 0.9
CFAP54Q96N23 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.69■□□□□ 0.9
CFAP54Q96N23 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.69■□□□□ 0.9
CFAP54Q96N23 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms