Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RITA1Q96K30 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RITA1Q96K30 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.84■□□□□ 0.29
RITA1Q96K30 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RITA1Q96K30 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.84■□□□□ 0.29
RITA1Q96K30 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RITA1Q96K30 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RITA1Q96K30 AC097381.1-201ENST00000429019 1296 ntBASIC16.84■□□□□ 0.29
RITA1Q96K30 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RITA1Q96K30 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RITA1Q96K30 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RITA1Q96K30 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RITA1Q96K30 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RITA1Q96K30 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RITA1Q96K30 AL049796.1-201ENST00000565336 1766 ntBASIC16.84■□□□□ 0.29
RITA1Q96K30 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RITA1Q96K30 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.84■□□□□ 0.29
RITA1Q96K30 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RITA1Q96K30 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.84■□□□□ 0.29
RITA1Q96K30 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RITA1Q96K30 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
RITA1Q96K30 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RITA1Q96K30 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RITA1Q96K30 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RITA1Q96K30 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RITA1Q96K30 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RITA1Q96K30 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RITA1Q96K30 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RITA1Q96K30 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RITA1Q96K30 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RITA1Q96K30 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RITA1Q96K30 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.83■□□□□ 0.28
RITA1Q96K30 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RITA1Q96K30 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RITA1Q96K30 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.83■□□□□ 0.28
RITA1Q96K30 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.83■□□□□ 0.28
RITA1Q96K30 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RITA1Q96K30 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.83■□□□□ 0.28
RITA1Q96K30 MIR6821-201ENST00000617625 74 ntBASIC16.83■□□□□ 0.28
RITA1Q96K30 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.83■□□□□ 0.28
RITA1Q96K30 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.83■□□□□ 0.28
RITA1Q96K30 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.83■□□□□ 0.28
RITA1Q96K30 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RITA1Q96K30 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RITA1Q96K30 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.82■□□□□ 0.28
RITA1Q96K30 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
RITA1Q96K30 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RITA1Q96K30 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RITA1Q96K30 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RITA1Q96K30 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RITA1Q96K30 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.82■□□□□ 0.28
RITA1Q96K30 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RITA1Q96K30 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.82■□□□□ 0.28
RITA1Q96K30 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.82■□□□□ 0.28
RITA1Q96K30 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.82■□□□□ 0.28
RITA1Q96K30 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RITA1Q96K30 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.82■□□□□ 0.28
RITA1Q96K30 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RITA1Q96K30 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.82■□□□□ 0.28
RITA1Q96K30 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.82■□□□□ 0.28
RITA1Q96K30 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
RITA1Q96K30 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RITA1Q96K30 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RITA1Q96K30 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RITA1Q96K30 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RITA1Q96K30 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RITA1Q96K30 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RITA1Q96K30 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
RITA1Q96K30 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.81■□□□□ 0.28
RITA1Q96K30 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.81■□□□□ 0.28
RITA1Q96K30 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.81■□□□□ 0.28
RITA1Q96K30 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RITA1Q96K30 AC026271.2-201ENST00000428091 497 ntBASIC16.81■□□□□ 0.28
RITA1Q96K30 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.81■□□□□ 0.28
RITA1Q96K30 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.81■□□□□ 0.28
RITA1Q96K30 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.81■□□□□ 0.28
RITA1Q96K30 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.81■□□□□ 0.28
RITA1Q96K30 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.81■□□□□ 0.28
RITA1Q96K30 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.81■□□□□ 0.28
RITA1Q96K30 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RITA1Q96K30 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.81■□□□□ 0.28
RITA1Q96K30 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RITA1Q96K30 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RITA1Q96K30 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RITA1Q96K30 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RITA1Q96K30 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RITA1Q96K30 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RITA1Q96K30 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RITA1Q96K30 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RITA1Q96K30 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RITA1Q96K30 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RITA1Q96K30 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RITA1Q96K30 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.8■□□□□ 0.28
RITA1Q96K30 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.8■□□□□ 0.28
RITA1Q96K30 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.8■□□□□ 0.28
RITA1Q96K30 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.8■□□□□ 0.28
RITA1Q96K30 AC138907.5-202ENST00000569484 235 ntBASIC16.8■□□□□ 0.28
RITA1Q96K30 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.8■□□□□ 0.28
RITA1Q96K30 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RITA1Q96K30 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms