Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CHMP6Q96FZ7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP6Q96FZ7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP6Q96FZ7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.06■□□□□ 0.96
CHMP6Q96FZ7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP6Q96FZ7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP6Q96FZ7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP6Q96FZ7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP6Q96FZ7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP6Q96FZ7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP6Q96FZ7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP6Q96FZ7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP6Q96FZ7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.06■□□□□ 0.96
CHMP6Q96FZ7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CHMP6Q96FZ7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP6Q96FZ7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP6Q96FZ7 AC005703.6-201ENST00000623265 1329 ntBASIC21.05■□□□□ 0.96
CHMP6Q96FZ7 AC239859.2-201ENST00000444165 318 ntBASIC21.05■□□□□ 0.96
CHMP6Q96FZ7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP6Q96FZ7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP6Q96FZ7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP6Q96FZ7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP6Q96FZ7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP6Q96FZ7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.05■□□□□ 0.96
CHMP6Q96FZ7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP6Q96FZ7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.05■□□□□ 0.96
CHMP6Q96FZ7 PLK5-205ENST00000642079 1969 ntBASIC21.05■□□□□ 0.96
CHMP6Q96FZ7 OR7E47P-201ENST00000546390 1422 ntBASIC21.04■□□□□ 0.96
CHMP6Q96FZ7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CHMP6Q96FZ7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CHMP6Q96FZ7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP6Q96FZ7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP6Q96FZ7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP6Q96FZ7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CHMP6Q96FZ7 MIR4787-201ENST00000607364 84 ntBASIC21.04■□□□□ 0.96
CHMP6Q96FZ7 AC027702.1-201ENST00000563810 1770 ntBASIC21.04■□□□□ 0.96
CHMP6Q96FZ7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP6Q96FZ7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP6Q96FZ7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.04■□□□□ 0.96
CHMP6Q96FZ7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CHMP6Q96FZ7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP6Q96FZ7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP6Q96FZ7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CHMP6Q96FZ7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CHMP6Q96FZ7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.03■□□□□ 0.96
CHMP6Q96FZ7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.03■□□□□ 0.96
CHMP6Q96FZ7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.03■□□□□ 0.96
CHMP6Q96FZ7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP6Q96FZ7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CHMP6Q96FZ7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.03■□□□□ 0.96
CHMP6Q96FZ7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP6Q96FZ7 AC009299.2-201ENST00000482477 511 ntBASIC21.03■□□□□ 0.96
CHMP6Q96FZ7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CHMP6Q96FZ7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP6Q96FZ7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.03■□□□□ 0.96
CHMP6Q96FZ7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP6Q96FZ7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.03■□□□□ 0.96
CHMP6Q96FZ7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CHMP6Q96FZ7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP6Q96FZ7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP6Q96FZ7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP6Q96FZ7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.02■□□□□ 0.96
CHMP6Q96FZ7 SMG8-203ENST00000578922 2178 ntBASIC21.02■□□□□ 0.96
CHMP6Q96FZ7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.02■□□□□ 0.96
CHMP6Q96FZ7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP6Q96FZ7 TSPY9P-201ENST00000440215 945 ntBASIC21.02■□□□□ 0.96
CHMP6Q96FZ7 TSPY11P-201ENST00000442607 1045 ntBASIC21.02■□□□□ 0.96
CHMP6Q96FZ7 Z92544.1-202ENST00000571933 1220 ntBASIC21.02■□□□□ 0.96
CHMP6Q96FZ7 MTDHP2-201ENST00000601468 714 ntBASIC21.02■□□□□ 0.96
CHMP6Q96FZ7 AL451085.2-201ENST00000605085 799 ntBASIC21.02■□□□□ 0.96
CHMP6Q96FZ7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.02■□□□□ 0.96
CHMP6Q96FZ7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
CHMP6Q96FZ7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP6Q96FZ7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CHMP6Q96FZ7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP6Q96FZ7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP6Q96FZ7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
CHMP6Q96FZ7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.02■□□□□ 0.95
CHMP6Q96FZ7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.01■□□□□ 0.95
CHMP6Q96FZ7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP6Q96FZ7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.01■□□□□ 0.95
CHMP6Q96FZ7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CHMP6Q96FZ7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP6Q96FZ7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
CHMP6Q96FZ7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP6Q96FZ7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CHMP6Q96FZ7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP6Q96FZ7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMP6Q96FZ7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMP6Q96FZ7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.01■□□□□ 0.95
CHMP6Q96FZ7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP6Q96FZ7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP6Q96FZ7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP6Q96FZ7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CHMP6Q96FZ7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CHMP6Q96FZ7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21■□□□□ 0.95
CHMP6Q96FZ7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
CHMP6Q96FZ7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
CHMP6Q96FZ7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms