Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.53■■□□□ 1.04
IFT43Q96FT9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.53■■□□□ 1.04
IFT43Q96FT9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.53■■□□□ 1.04
IFT43Q96FT9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.53■■□□□ 1.04
IFT43Q96FT9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.53■■□□□ 1.04
IFT43Q96FT9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.53■■□□□ 1.04
IFT43Q96FT9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.53■■□□□ 1.04
IFT43Q96FT9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IFT43Q96FT9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IFT43Q96FT9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
IFT43Q96FT9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.53■■□□□ 1.04
IFT43Q96FT9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
IFT43Q96FT9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
IFT43Q96FT9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
IFT43Q96FT9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
IFT43Q96FT9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IFT43Q96FT9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
IFT43Q96FT9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IFT43Q96FT9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IFT43Q96FT9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IFT43Q96FT9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
IFT43Q96FT9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
IFT43Q96FT9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IFT43Q96FT9 AC003102.1-202ENST00000563394 1796 ntBASIC21.52■■□□□ 1.04
IFT43Q96FT9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IFT43Q96FT9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.52■■□□□ 1.04
IFT43Q96FT9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
IFT43Q96FT9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
IFT43Q96FT9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
IFT43Q96FT9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
IFT43Q96FT9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IFT43Q96FT9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
IFT43Q96FT9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
IFT43Q96FT9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.52■■□□□ 1.03
IFT43Q96FT9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
IFT43Q96FT9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
IFT43Q96FT9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.51■■□□□ 1.03
IFT43Q96FT9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
IFT43Q96FT9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
IFT43Q96FT9 AC055733.4-201ENST00000638462 1354 ntBASIC21.51■■□□□ 1.03
IFT43Q96FT9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
IFT43Q96FT9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
IFT43Q96FT9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
IFT43Q96FT9 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.51■■□□□ 1.03
IFT43Q96FT9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.51■■□□□ 1.03
IFT43Q96FT9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
IFT43Q96FT9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.51■■□□□ 1.03
IFT43Q96FT9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.51■■□□□ 1.03
IFT43Q96FT9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IFT43Q96FT9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IFT43Q96FT9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IFT43Q96FT9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
IFT43Q96FT9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IFT43Q96FT9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.51■■□□□ 1.03
IFT43Q96FT9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
IFT43Q96FT9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IFT43Q96FT9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
IFT43Q96FT9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.5■■□□□ 1.03
IFT43Q96FT9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
IFT43Q96FT9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.5■■□□□ 1.03
IFT43Q96FT9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IFT43Q96FT9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.5■■□□□ 1.03
IFT43Q96FT9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.5■■□□□ 1.03
IFT43Q96FT9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
IFT43Q96FT9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.5■■□□□ 1.03
IFT43Q96FT9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IFT43Q96FT9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IFT43Q96FT9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IFT43Q96FT9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
IFT43Q96FT9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
IFT43Q96FT9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
IFT43Q96FT9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IFT43Q96FT9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
IFT43Q96FT9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
IFT43Q96FT9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.49■■□□□ 1.03
IFT43Q96FT9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
IFT43Q96FT9 AC006015.1-201ENST00000429970 570 ntBASIC21.49■■□□□ 1.03
IFT43Q96FT9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.49■■□□□ 1.03
IFT43Q96FT9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
IFT43Q96FT9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IFT43Q96FT9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
IFT43Q96FT9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IFT43Q96FT9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IFT43Q96FT9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.48■■□□□ 1.03
IFT43Q96FT9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
IFT43Q96FT9 AC244015.2-201ENST00000616358 1861 ntBASIC21.48■■□□□ 1.03
IFT43Q96FT9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IFT43Q96FT9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.48■■□□□ 1.03
IFT43Q96FT9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.48■■□□□ 1.03
IFT43Q96FT9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.48■■□□□ 1.03
IFT43Q96FT9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IFT43Q96FT9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IFT43Q96FT9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IFT43Q96FT9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IFT43Q96FT9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
IFT43Q96FT9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.48■■□□□ 1.03
IFT43Q96FT9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
IFT43Q96FT9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IFT43Q96FT9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
IFT43Q96FT9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms