Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 TPRG1LP1-201ENST00000598702 760 ntBASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 AL358852.1-201ENST00000623174 1268 ntBASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF439Q8NDP4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ZNF439Q8NDP4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF439Q8NDP4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF439Q8NDP4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
ZNF439Q8NDP4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF439Q8NDP4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNF439Q8NDP4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF439Q8NDP4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF439Q8NDP4 AC105265.2-201ENST00000467189 838 ntBASIC17.31■□□□□ 0.36
ZNF439Q8NDP4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.31■□□□□ 0.36
ZNF439Q8NDP4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNF439Q8NDP4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF439Q8NDP4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ZNF439Q8NDP4 SLC25A24-204ENST00000569674 2357 ntBASIC17.31■□□□□ 0.36
ZNF439Q8NDP4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ZNF439Q8NDP4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF439Q8NDP4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF439Q8NDP4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ZNF439Q8NDP4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.3■□□□□ 0.36
ZNF439Q8NDP4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF439Q8NDP4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF439Q8NDP4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF439Q8NDP4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF439Q8NDP4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF439Q8NDP4 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF439Q8NDP4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.3■□□□□ 0.36
ZNF439Q8NDP4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF439Q8NDP4 AC005229.4-201ENST00000610085 2198 ntBASIC17.3■□□□□ 0.36
ZNF439Q8NDP4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF439Q8NDP4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF439Q8NDP4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 IRS3P-201ENST00000223076 1006 ntBASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF439Q8NDP4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 MIR6084-201ENST00000622012 110 ntBASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.28■□□□□ 0.36
ZNF439Q8NDP4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms