Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSMEM1Q8N8F7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSMEM1Q8N8F7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSMEM1Q8N8F7 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.17■□□□□ 0.66
LSMEM1Q8N8F7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.17■□□□□ 0.66
LSMEM1Q8N8F7 EEF1DP3-203ENST00000566025 782 ntBASIC19.17■□□□□ 0.66
LSMEM1Q8N8F7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.17■□□□□ 0.66
LSMEM1Q8N8F7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSMEM1Q8N8F7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LSMEM1Q8N8F7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.17■□□□□ 0.66
LSMEM1Q8N8F7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
LSMEM1Q8N8F7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSMEM1Q8N8F7 IRS3P-201ENST00000223076 1006 ntBASIC19.16■□□□□ 0.66
LSMEM1Q8N8F7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.16■□□□□ 0.66
LSMEM1Q8N8F7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.16■□□□□ 0.66
LSMEM1Q8N8F7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSMEM1Q8N8F7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSMEM1Q8N8F7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LSMEM1Q8N8F7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSMEM1Q8N8F7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSMEM1Q8N8F7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 MIR638-201ENST00000385237 100 ntBASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LSMEM1Q8N8F7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.14■□□□□ 0.66
LSMEM1Q8N8F7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LSMEM1Q8N8F7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSMEM1Q8N8F7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSMEM1Q8N8F7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LSMEM1Q8N8F7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LSMEM1Q8N8F7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSMEM1Q8N8F7 AC105265.2-201ENST00000467189 838 ntBASIC19.14■□□□□ 0.65
LSMEM1Q8N8F7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
LSMEM1Q8N8F7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.14■□□□□ 0.65
LSMEM1Q8N8F7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LSMEM1Q8N8F7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LSMEM1Q8N8F7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.14■□□□□ 0.65
LSMEM1Q8N8F7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LSMEM1Q8N8F7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSMEM1Q8N8F7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSMEM1Q8N8F7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LSMEM1Q8N8F7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.13■□□□□ 0.65
LSMEM1Q8N8F7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSMEM1Q8N8F7 AC027612.3-201ENST00000413684 1047 ntBASIC19.13■□□□□ 0.65
LSMEM1Q8N8F7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSMEM1Q8N8F7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSMEM1Q8N8F7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSMEM1Q8N8F7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSMEM1Q8N8F7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LSMEM1Q8N8F7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
LSMEM1Q8N8F7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSMEM1Q8N8F7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSMEM1Q8N8F7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LSMEM1Q8N8F7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LSMEM1Q8N8F7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LSMEM1Q8N8F7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSMEM1Q8N8F7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSMEM1Q8N8F7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSMEM1Q8N8F7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSMEM1Q8N8F7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSMEM1Q8N8F7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSMEM1Q8N8F7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
LSMEM1Q8N8F7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LSMEM1Q8N8F7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.12■□□□□ 0.65
LSMEM1Q8N8F7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.12■□□□□ 0.65
LSMEM1Q8N8F7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSMEM1Q8N8F7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSMEM1Q8N8F7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSMEM1Q8N8F7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.12■□□□□ 0.65
LSMEM1Q8N8F7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LSMEM1Q8N8F7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms