Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.56■□□□□ 0.24
TTC9CQ8N5M4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.56■□□□□ 0.24
TTC9CQ8N5M4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC9CQ8N5M4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC9CQ8N5M4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TTC9CQ8N5M4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.56■□□□□ 0.24
TTC9CQ8N5M4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.56■□□□□ 0.24
TTC9CQ8N5M4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.56■□□□□ 0.24
TTC9CQ8N5M4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TTC9CQ8N5M4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TTC9CQ8N5M4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TTC9CQ8N5M4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC9CQ8N5M4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC9CQ8N5M4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TTC9CQ8N5M4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TTC9CQ8N5M4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TTC9CQ8N5M4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC9CQ8N5M4 ZNRF2P3-201ENST00000424200 374 ntBASIC16.55■□□□□ 0.24
TTC9CQ8N5M4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TTC9CQ8N5M4 YBX1P1-201ENST00000445822 960 ntBASIC16.55■□□□□ 0.24
TTC9CQ8N5M4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC9CQ8N5M4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.55■□□□□ 0.24
TTC9CQ8N5M4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.55■□□□□ 0.24
TTC9CQ8N5M4 AL137060.1-201ENST00000618151 2648 ntBASIC16.55■□□□□ 0.24
TTC9CQ8N5M4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TTC9CQ8N5M4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.55■□□□□ 0.24
TTC9CQ8N5M4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TTC9CQ8N5M4 KRT87P-202ENST00000534226 1464 ntBASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TTC9CQ8N5M4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 AC005229.4-201ENST00000610085 2198 ntBASIC16.53■□□□□ 0.24
TTC9CQ8N5M4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TTC9CQ8N5M4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TTC9CQ8N5M4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TTC9CQ8N5M4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TTC9CQ8N5M4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.52■□□□□ 0.24
TTC9CQ8N5M4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TTC9CQ8N5M4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TTC9CQ8N5M4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TTC9CQ8N5M4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TTC9CQ8N5M4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TTC9CQ8N5M4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TTC9CQ8N5M4 AL049796.1-201ENST00000565336 1766 ntBASIC16.51■□□□□ 0.23
TTC9CQ8N5M4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TTC9CQ8N5M4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.51■□□□□ 0.23
TTC9CQ8N5M4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC9CQ8N5M4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC9CQ8N5M4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.51■□□□□ 0.23
TTC9CQ8N5M4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TTC9CQ8N5M4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC9CQ8N5M4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TTC9CQ8N5M4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.51■□□□□ 0.23
TTC9CQ8N5M4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.51■□□□□ 0.23
TTC9CQ8N5M4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.51■□□□□ 0.23
TTC9CQ8N5M4 TERF1P2-201ENST00000583350 1212 ntBASIC16.51■□□□□ 0.23
TTC9CQ8N5M4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.51■□□□□ 0.23
TTC9CQ8N5M4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms