Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC39CQ8N584 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TTC39CQ8N584 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC39CQ8N584 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC39CQ8N584 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.33■■□□□ 1.17
TTC39CQ8N584 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TTC39CQ8N584 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
TTC39CQ8N584 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TTC39CQ8N584 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TTC39CQ8N584 AC006015.1-201ENST00000429970 570 ntBASIC22.33■■□□□ 1.17
TTC39CQ8N584 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TTC39CQ8N584 SLC7A5P2-201ENST00000553010 536 ntBASIC22.33■■□□□ 1.17
TTC39CQ8N584 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.33■■□□□ 1.17
TTC39CQ8N584 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.33■■□□□ 1.17
TTC39CQ8N584 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TTC39CQ8N584 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.33■■□□□ 1.17
TTC39CQ8N584 AC022517.1-201ENST00000592429 346 ntBASIC22.33■■□□□ 1.17
TTC39CQ8N584 MYCNOS-205ENST00000641950 531 ntBASIC22.33■■□□□ 1.17
TTC39CQ8N584 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.33■■□□□ 1.17
TTC39CQ8N584 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.33■■□□□ 1.17
TTC39CQ8N584 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.33■■□□□ 1.16
TTC39CQ8N584 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
TTC39CQ8N584 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.33■■□□□ 1.16
TTC39CQ8N584 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TTC39CQ8N584 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.32■■□□□ 1.16
TTC39CQ8N584 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.32■■□□□ 1.16
TTC39CQ8N584 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TTC39CQ8N584 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TTC39CQ8N584 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.32■■□□□ 1.16
TTC39CQ8N584 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TTC39CQ8N584 UBE2DNL-204ENST00000602536 740 ntBASIC22.32■■□□□ 1.16
TTC39CQ8N584 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.32■■□□□ 1.16
TTC39CQ8N584 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.32■■□□□ 1.16
TTC39CQ8N584 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
TTC39CQ8N584 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TTC39CQ8N584 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
TTC39CQ8N584 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
TTC39CQ8N584 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TTC39CQ8N584 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TTC39CQ8N584 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TTC39CQ8N584 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.31■■□□□ 1.16
TTC39CQ8N584 AC245052.3-201ENST00000450182 901 ntBASIC22.31■■□□□ 1.16
TTC39CQ8N584 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.31■■□□□ 1.16
TTC39CQ8N584 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.31■■□□□ 1.16
TTC39CQ8N584 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TTC39CQ8N584 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
TTC39CQ8N584 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TTC39CQ8N584 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
TTC39CQ8N584 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.3■■□□□ 1.16
TTC39CQ8N584 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.3■■□□□ 1.16
TTC39CQ8N584 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.3■■□□□ 1.16
TTC39CQ8N584 AC243732.1-201ENST00000612648 864 ntBASIC22.3■■□□□ 1.16
TTC39CQ8N584 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.3■■□□□ 1.16
TTC39CQ8N584 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TTC39CQ8N584 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TTC39CQ8N584 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
TTC39CQ8N584 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TTC39CQ8N584 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TTC39CQ8N584 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.29■■□□□ 1.16
TTC39CQ8N584 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TTC39CQ8N584 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
TTC39CQ8N584 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
TTC39CQ8N584 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.29■■□□□ 1.16
TTC39CQ8N584 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TTC39CQ8N584 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.29■■□□□ 1.16
TTC39CQ8N584 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.29■■□□□ 1.16
TTC39CQ8N584 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.29■■□□□ 1.16
TTC39CQ8N584 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TTC39CQ8N584 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TTC39CQ8N584 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TTC39CQ8N584 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TTC39CQ8N584 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TTC39CQ8N584 PKD1P6-201ENST00000343738 4769 ntBASIC22.28■■□□□ 1.16
TTC39CQ8N584 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TTC39CQ8N584 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TTC39CQ8N584 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TTC39CQ8N584 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TTC39CQ8N584 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.28■■□□□ 1.16
TTC39CQ8N584 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.28■■□□□ 1.16
TTC39CQ8N584 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.28■■□□□ 1.16
TTC39CQ8N584 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.28■■□□□ 1.16
TTC39CQ8N584 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TTC39CQ8N584 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TTC39CQ8N584 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TTC39CQ8N584 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TTC39CQ8N584 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TTC39CQ8N584 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TTC39CQ8N584 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TTC39CQ8N584 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.28■■□□□ 1.16
TTC39CQ8N584 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TTC39CQ8N584 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TTC39CQ8N584 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TTC39CQ8N584 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
TTC39CQ8N584 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TTC39CQ8N584 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.27■■□□□ 1.16
TTC39CQ8N584 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TTC39CQ8N584 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TTC39CQ8N584 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.27■■□□□ 1.16
TTC39CQ8N584 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TTC39CQ8N584 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms