Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HIST3H2BBQ8N257 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 AC099778.1-201ENST00000568593 1911 ntBASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HIST3H2BBQ8N257 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.71■□□□□ 0.11
HIST3H2BBQ8N257 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.71■□□□□ 0.11
HIST3H2BBQ8N257 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
HIST3H2BBQ8N257 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
HIST3H2BBQ8N257 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
HIST3H2BBQ8N257 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST3H2BBQ8N257 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST3H2BBQ8N257 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
HIST3H2BBQ8N257 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST3H2BBQ8N257 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.71■□□□□ 0.11
HIST3H2BBQ8N257 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST3H2BBQ8N257 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST3H2BBQ8N257 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST3H2BBQ8N257 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.71■□□□□ 0.11
HIST3H2BBQ8N257 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST3H2BBQ8N257 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
HIST3H2BBQ8N257 LINC01960-201ENST00000563759 1884 ntBASIC15.71■□□□□ 0.11
HIST3H2BBQ8N257 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST3H2BBQ8N257 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.71■□□□□ 0.11
HIST3H2BBQ8N257 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HIST3H2BBQ8N257 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HIST3H2BBQ8N257 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HIST3H2BBQ8N257 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST3H2BBQ8N257 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST3H2BBQ8N257 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST3H2BBQ8N257 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST3H2BBQ8N257 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.69■□□□□ 0.1
HIST3H2BBQ8N257 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST3H2BBQ8N257 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.69■□□□□ 0.1
HIST3H2BBQ8N257 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HIST3H2BBQ8N257 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.69■□□□□ 0.1
HIST3H2BBQ8N257 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIST3H2BBQ8N257 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.69■□□□□ 0.1
HIST3H2BBQ8N257 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIST3H2BBQ8N257 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST3H2BBQ8N257 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST3H2BBQ8N257 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
HIST3H2BBQ8N257 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms