Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
SMC5Q8IY18 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SMC5Q8IY18 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
SMC5Q8IY18 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC26.02■■□□□ 1.76
SMC5Q8IY18 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC26.02■■□□□ 1.76
SMC5Q8IY18 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
SMC5Q8IY18 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
SMC5Q8IY18 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SMC5Q8IY18 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
SMC5Q8IY18 MIR638-201ENST00000385237 100 ntBASIC26.01■■□□□ 1.75
SMC5Q8IY18 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SMC5Q8IY18 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC26.01■■□□□ 1.75
SMC5Q8IY18 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
SMC5Q8IY18 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SMC5Q8IY18 AC105265.2-201ENST00000467189 838 ntBASIC26.01■■□□□ 1.75
SMC5Q8IY18 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SMC5Q8IY18 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SMC5Q8IY18 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SMC5Q8IY18 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
SMC5Q8IY18 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC26.01■■□□□ 1.75
SMC5Q8IY18 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SMC5Q8IY18 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
SMC5Q8IY18 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
SMC5Q8IY18 AC061975.6-201ENST00000579045 1553 ntBASIC26■■□□□ 1.75
SMC5Q8IY18 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC26■■□□□ 1.75
SMC5Q8IY18 IRS3P-201ENST00000223076 1006 ntBASIC26■■□□□ 1.75
SMC5Q8IY18 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
SMC5Q8IY18 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26■■□□□ 1.75
SMC5Q8IY18 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC26■■□□□ 1.75
SMC5Q8IY18 FEM1AP1-201ENST00000431297 1995 ntBASIC26■■□□□ 1.75
SMC5Q8IY18 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC26■■□□□ 1.75
SMC5Q8IY18 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SMC5Q8IY18 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SMC5Q8IY18 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC25.99■■□□□ 1.75
SMC5Q8IY18 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC25.99■■□□□ 1.75
SMC5Q8IY18 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
SMC5Q8IY18 AC027612.3-201ENST00000413684 1047 ntBASIC25.99■■□□□ 1.75
SMC5Q8IY18 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.99■■□□□ 1.75
SMC5Q8IY18 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.99■■□□□ 1.75
SMC5Q8IY18 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
SMC5Q8IY18 SLC25A24-204ENST00000569674 2357 ntBASIC25.99■■□□□ 1.75
SMC5Q8IY18 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SMC5Q8IY18 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SMC5Q8IY18 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC25.99■■□□□ 1.75
SMC5Q8IY18 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
SMC5Q8IY18 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC25.99■■□□□ 1.75
SMC5Q8IY18 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
SMC5Q8IY18 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC25.99■■□□□ 1.75
SMC5Q8IY18 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMC5Q8IY18 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
SMC5Q8IY18 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
SMC5Q8IY18 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC25.98■■□□□ 1.75
SMC5Q8IY18 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMC5Q8IY18 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
SMC5Q8IY18 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SMC5Q8IY18 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMC5Q8IY18 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMC5Q8IY18 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMC5Q8IY18 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMC5Q8IY18 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC25.98■■□□□ 1.75
SMC5Q8IY18 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SMC5Q8IY18 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMC5Q8IY18 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMC5Q8IY18 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SMC5Q8IY18 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
SMC5Q8IY18 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.97■■□□□ 1.75
SMC5Q8IY18 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SMC5Q8IY18 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.97■■□□□ 1.75
SMC5Q8IY18 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SMC5Q8IY18 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SMC5Q8IY18 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
SMC5Q8IY18 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SMC5Q8IY18 LINC01521-201ENST00000504184 1943 ntBASIC25.96■■□□□ 1.75
SMC5Q8IY18 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
SMC5Q8IY18 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.96■■□□□ 1.75
SMC5Q8IY18 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SMC5Q8IY18 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC25.96■■□□□ 1.75
SMC5Q8IY18 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SMC5Q8IY18 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.96■■□□□ 1.75
SMC5Q8IY18 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.96■■□□□ 1.75
SMC5Q8IY18 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
SMC5Q8IY18 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SMC5Q8IY18 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SMC5Q8IY18 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
SMC5Q8IY18 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SMC5Q8IY18 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
SMC5Q8IY18 AC073130.3-201ENST00000624389 2278 ntBASIC25.95■■□□□ 1.75
SMC5Q8IY18 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC25.95■■□□□ 1.75
SMC5Q8IY18 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.75
SMC5Q8IY18 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
SMC5Q8IY18 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC25.95■■□□□ 1.74
SMC5Q8IY18 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SMC5Q8IY18 AC121338.2-201ENST00000622535 1744 ntBASIC25.95■■□□□ 1.74
SMC5Q8IY18 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SMC5Q8IY18 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC25.95■■□□□ 1.74
SMC5Q8IY18 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
SMC5Q8IY18 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC25.95■■□□□ 1.74
SMC5Q8IY18 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.95■■□□□ 1.74
SMC5Q8IY18 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
SMC5Q8IY18 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms