Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 AC120498.10-201ENST00000621827 505 ntBASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 AC137767.1-201ENST00000602918 1920 ntBASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RP1L1Q8IWN7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RP1L1Q8IWN7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
RP1L1Q8IWN7 C9orf163-202ENST00000624034 2573 ntBASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 AL591742.1-201ENST00000604433 565 ntBASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RP1L1Q8IWN7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RP1L1Q8IWN7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RP1L1Q8IWN7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RP1L1Q8IWN7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.94■□□□□ 0.62
RP1L1Q8IWN7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RP1L1Q8IWN7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RP1L1Q8IWN7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.94■□□□□ 0.62
RP1L1Q8IWN7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RP1L1Q8IWN7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RP1L1Q8IWN7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.94■□□□□ 0.62
RP1L1Q8IWN7 Z99916.2-201ENST00000604037 246 ntBASIC18.94■□□□□ 0.62
RP1L1Q8IWN7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RP1L1Q8IWN7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RP1L1Q8IWN7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RP1L1Q8IWN7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RP1L1Q8IWN7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.93■□□□□ 0.62
RP1L1Q8IWN7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RP1L1Q8IWN7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.93■□□□□ 0.62
RP1L1Q8IWN7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RP1L1Q8IWN7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.93■□□□□ 0.62
RP1L1Q8IWN7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RP1L1Q8IWN7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
RP1L1Q8IWN7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RP1L1Q8IWN7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RP1L1Q8IWN7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RP1L1Q8IWN7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RP1L1Q8IWN7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RP1L1Q8IWN7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RP1L1Q8IWN7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.92■□□□□ 0.62
RP1L1Q8IWN7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms