Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
APLFQ8IW19 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APLFQ8IW19 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APLFQ8IW19 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.65■□□□□ 0.9
APLFQ8IW19 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APLFQ8IW19 AC010525.1-201ENST00000585559 441 ntBASIC20.65■□□□□ 0.9
APLFQ8IW19 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.65■□□□□ 0.9
APLFQ8IW19 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APLFQ8IW19 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APLFQ8IW19 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.65■□□□□ 0.9
APLFQ8IW19 AC010542.4-201ENST00000563151 1910 ntBASIC20.65■□□□□ 0.9
APLFQ8IW19 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.64■□□□□ 0.9
APLFQ8IW19 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.64■□□□□ 0.9
APLFQ8IW19 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.64■□□□□ 0.9
APLFQ8IW19 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
APLFQ8IW19 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
APLFQ8IW19 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
APLFQ8IW19 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
APLFQ8IW19 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APLFQ8IW19 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
APLFQ8IW19 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.64■□□□□ 0.89
APLFQ8IW19 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
APLFQ8IW19 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
APLFQ8IW19 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
APLFQ8IW19 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.64■□□□□ 0.89
APLFQ8IW19 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
APLFQ8IW19 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
APLFQ8IW19 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.64■□□□□ 0.89
APLFQ8IW19 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
APLFQ8IW19 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
APLFQ8IW19 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APLFQ8IW19 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APLFQ8IW19 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
APLFQ8IW19 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
APLFQ8IW19 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APLFQ8IW19 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
APLFQ8IW19 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APLFQ8IW19 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APLFQ8IW19 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
APLFQ8IW19 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APLFQ8IW19 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APLFQ8IW19 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.63■□□□□ 0.89
APLFQ8IW19 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
APLFQ8IW19 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.63■□□□□ 0.89
APLFQ8IW19 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
APLFQ8IW19 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APLFQ8IW19 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APLFQ8IW19 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
APLFQ8IW19 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
APLFQ8IW19 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
APLFQ8IW19 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.63■□□□□ 0.89
APLFQ8IW19 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
APLFQ8IW19 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APLFQ8IW19 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APLFQ8IW19 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.62■□□□□ 0.89
APLFQ8IW19 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
APLFQ8IW19 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APLFQ8IW19 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
APLFQ8IW19 ID1-201ENST00000376105 1233 ntBASIC20.62■□□□□ 0.89
APLFQ8IW19 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.62■□□□□ 0.89
APLFQ8IW19 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.62■□□□□ 0.89
APLFQ8IW19 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
APLFQ8IW19 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
APLFQ8IW19 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APLFQ8IW19 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
APLFQ8IW19 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.62■□□□□ 0.89
APLFQ8IW19 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
APLFQ8IW19 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
APLFQ8IW19 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
APLFQ8IW19 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
APLFQ8IW19 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.61■□□□□ 0.89
APLFQ8IW19 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
APLFQ8IW19 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
APLFQ8IW19 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
APLFQ8IW19 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
APLFQ8IW19 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
APLFQ8IW19 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.61■□□□□ 0.89
APLFQ8IW19 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.61■□□□□ 0.89
APLFQ8IW19 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
APLFQ8IW19 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
APLFQ8IW19 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
APLFQ8IW19 AC079630.1-202ENST00000618127 1840 ntBASIC20.61■□□□□ 0.89
APLFQ8IW19 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
APLFQ8IW19 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
APLFQ8IW19 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.61■□□□□ 0.89
APLFQ8IW19 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.61■□□□□ 0.89
APLFQ8IW19 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
APLFQ8IW19 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
APLFQ8IW19 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
APLFQ8IW19 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.6■□□□□ 0.89
APLFQ8IW19 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
APLFQ8IW19 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.6■□□□□ 0.89
APLFQ8IW19 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.6■□□□□ 0.89
APLFQ8IW19 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.6■□□□□ 0.89
APLFQ8IW19 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.6■□□□□ 0.89
APLFQ8IW19 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
APLFQ8IW19 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
APLFQ8IW19 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.6■□□□□ 0.89
APLFQ8IW19 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APLFQ8IW19 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms