Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CROCCP3Q8IVE0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CROCCP3Q8IVE0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CROCCP3Q8IVE0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CROCCP3Q8IVE0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CROCCP3Q8IVE0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CROCCP3Q8IVE0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CROCCP3Q8IVE0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CROCCP3Q8IVE0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CROCCP3Q8IVE0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CROCCP3Q8IVE0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.97■□□□□ 0.63
CROCCP3Q8IVE0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.97■□□□□ 0.63
CROCCP3Q8IVE0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CROCCP3Q8IVE0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.97■□□□□ 0.63
CROCCP3Q8IVE0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CROCCP3Q8IVE0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CROCCP3Q8IVE0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CROCCP3Q8IVE0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CROCCP3Q8IVE0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CROCCP3Q8IVE0 AC009086.3-201ENST00000623486 1008 ntBASIC18.97■□□□□ 0.63
CROCCP3Q8IVE0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CROCCP3Q8IVE0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CROCCP3Q8IVE0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.97■□□□□ 0.63
CROCCP3Q8IVE0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CROCCP3Q8IVE0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CROCCP3Q8IVE0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CROCCP3Q8IVE0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CROCCP3Q8IVE0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CROCCP3Q8IVE0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CROCCP3Q8IVE0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CROCCP3Q8IVE0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CROCCP3Q8IVE0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CROCCP3Q8IVE0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CROCCP3Q8IVE0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.96■□□□□ 0.63
CROCCP3Q8IVE0 CA15P2-201ENST00000611168 834 ntBASIC18.96■□□□□ 0.63
CROCCP3Q8IVE0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CROCCP3Q8IVE0 AC116562.4-201ENST00000641316 2276 ntBASIC18.96■□□□□ 0.63
CROCCP3Q8IVE0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CROCCP3Q8IVE0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CROCCP3Q8IVE0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CROCCP3Q8IVE0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CROCCP3Q8IVE0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CROCCP3Q8IVE0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CROCCP3Q8IVE0 AC020916.1-201ENST00000587762 1774 ntBASIC18.96■□□□□ 0.63
CROCCP3Q8IVE0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CROCCP3Q8IVE0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CROCCP3Q8IVE0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CROCCP3Q8IVE0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CROCCP3Q8IVE0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CROCCP3Q8IVE0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CROCCP3Q8IVE0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CROCCP3Q8IVE0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CROCCP3Q8IVE0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CROCCP3Q8IVE0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.95■□□□□ 0.62
CROCCP3Q8IVE0 AC019171.1-201ENST00000601251 1056 ntBASIC18.95■□□□□ 0.62
CROCCP3Q8IVE0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CROCCP3Q8IVE0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CROCCP3Q8IVE0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.95■□□□□ 0.62
CROCCP3Q8IVE0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CROCCP3Q8IVE0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CROCCP3Q8IVE0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CROCCP3Q8IVE0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CROCCP3Q8IVE0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CROCCP3Q8IVE0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CROCCP3Q8IVE0 AF131216.4-201ENST00000638924 1588 ntBASIC18.93■□□□□ 0.62
CROCCP3Q8IVE0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CROCCP3Q8IVE0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CROCCP3Q8IVE0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.93■□□□□ 0.62
CROCCP3Q8IVE0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CROCCP3Q8IVE0 DUX4L9-201ENST00000449051 1259 ntBASIC18.93■□□□□ 0.62
CROCCP3Q8IVE0 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.93■□□□□ 0.62
CROCCP3Q8IVE0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CROCCP3Q8IVE0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CROCCP3Q8IVE0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CROCCP3Q8IVE0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CROCCP3Q8IVE0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CROCCP3Q8IVE0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.93■□□□□ 0.62
CROCCP3Q8IVE0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.93■□□□□ 0.62
CROCCP3Q8IVE0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CROCCP3Q8IVE0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms