Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NDUFA11Q86Y39 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NDUFA11Q86Y39 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NDUFA11Q86Y39 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.26■□□□□ 0.19
NDUFA11Q86Y39 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDUFA11Q86Y39 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDUFA11Q86Y39 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDUFA11Q86Y39 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
NDUFA11Q86Y39 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.25■□□□□ 0.19
NDUFA11Q86Y39 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.25■□□□□ 0.19
NDUFA11Q86Y39 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDUFA11Q86Y39 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDUFA11Q86Y39 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NDUFA11Q86Y39 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.25■□□□□ 0.19
NDUFA11Q86Y39 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDUFA11Q86Y39 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NDUFA11Q86Y39 AC097658.1-201ENST00000475555 843 ntBASIC16.25■□□□□ 0.19
NDUFA11Q86Y39 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDUFA11Q86Y39 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDUFA11Q86Y39 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NDUFA11Q86Y39 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 RARRES2P4-201ENST00000514074 484 ntBASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 ITM2C-210ENST00000620962 501 ntBASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NDUFA11Q86Y39 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 AC010980.2-201ENST00000587099 1412 ntBASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 KRT18P29-201ENST00000397031 1267 ntBASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFA11Q86Y39 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFA11Q86Y39 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFA11Q86Y39 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.22■□□□□ 0.19
NDUFA11Q86Y39 AC061975.6-201ENST00000579045 1553 ntBASIC16.22■□□□□ 0.19
NDUFA11Q86Y39 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFA11Q86Y39 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.22■□□□□ 0.19
NDUFA11Q86Y39 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.22■□□□□ 0.19
NDUFA11Q86Y39 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.22■□□□□ 0.19
NDUFA11Q86Y39 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.22■□□□□ 0.19
NDUFA11Q86Y39 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFA11Q86Y39 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFA11Q86Y39 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA11Q86Y39 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms