Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC25Q86WR0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC25Q86WR0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC25Q86WR0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC25Q86WR0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC25Q86WR0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC25Q86WR0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC25Q86WR0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
CCDC25Q86WR0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC25Q86WR0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC25Q86WR0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CCDC25Q86WR0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
CCDC25Q86WR0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC25Q86WR0 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.56■■□□□ 1.04
CCDC25Q86WR0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC25Q86WR0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC25Q86WR0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC25Q86WR0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC25Q86WR0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC25Q86WR0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC25Q86WR0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CCDC25Q86WR0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC25Q86WR0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CCDC25Q86WR0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC25Q86WR0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC25Q86WR0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC25Q86WR0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC25Q86WR0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CCDC25Q86WR0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC25Q86WR0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CCDC25Q86WR0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC25Q86WR0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC25Q86WR0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC25Q86WR0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.55■■□□□ 1.04
CCDC25Q86WR0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CCDC25Q86WR0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC25Q86WR0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC25Q86WR0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CCDC25Q86WR0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC25Q86WR0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC25Q86WR0 AL121603.2-201ENST00000557373 2117 ntBASIC21.55■■□□□ 1.04
CCDC25Q86WR0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
CCDC25Q86WR0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CCDC25Q86WR0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CCDC25Q86WR0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
CCDC25Q86WR0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
CCDC25Q86WR0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC25Q86WR0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC25Q86WR0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC25Q86WR0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC25Q86WR0 AC092171.4-201ENST00000609130 632 ntBASIC21.54■■□□□ 1.04
CCDC25Q86WR0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC25Q86WR0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC25Q86WR0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC25Q86WR0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC25Q86WR0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC25Q86WR0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC25Q86WR0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC25Q86WR0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC25Q86WR0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC25Q86WR0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CCDC25Q86WR0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC25Q86WR0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC25Q86WR0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC25Q86WR0 AC006128.1-201ENST00000624704 1661 ntBASIC21.53■■□□□ 1.04
CCDC25Q86WR0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC25Q86WR0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC25Q86WR0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
CCDC25Q86WR0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC25Q86WR0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC25Q86WR0 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.53■■□□□ 1.04
CCDC25Q86WR0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CCDC25Q86WR0 MIR3621-201ENST00000580529 85 ntBASIC21.53■■□□□ 1.04
CCDC25Q86WR0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC25Q86WR0 AC073314.1-201ENST00000568729 2216 ntBASIC21.53■■□□□ 1.04
CCDC25Q86WR0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CCDC25Q86WR0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC25Q86WR0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CCDC25Q86WR0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC25Q86WR0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC25Q86WR0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CCDC25Q86WR0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC25Q86WR0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
CCDC25Q86WR0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC25Q86WR0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC25Q86WR0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC25Q86WR0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC25Q86WR0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC25Q86WR0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC25Q86WR0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC25Q86WR0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC25Q86WR0 PLK5-205ENST00000642079 1969 ntBASIC21.52■■□□□ 1.04
CCDC25Q86WR0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC25Q86WR0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
CCDC25Q86WR0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC25Q86WR0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC25Q86WR0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC25Q86WR0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC25Q86WR0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC25Q86WR0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms