Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC190Q86UF4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC190Q86UF4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC190Q86UF4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC190Q86UF4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC190Q86UF4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC190Q86UF4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC190Q86UF4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCDC190Q86UF4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC190Q86UF4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC190Q86UF4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC190Q86UF4 THA1P-201ENST00000590384 1145 ntBASIC18.28■□□□□ 0.52
CCDC190Q86UF4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC190Q86UF4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC190Q86UF4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC190Q86UF4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC190Q86UF4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC190Q86UF4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CCDC190Q86UF4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC190Q86UF4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC190Q86UF4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC190Q86UF4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC190Q86UF4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
CCDC190Q86UF4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CCDC190Q86UF4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC190Q86UF4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CCDC190Q86UF4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC190Q86UF4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CCDC190Q86UF4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CCDC190Q86UF4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC190Q86UF4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC190Q86UF4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC190Q86UF4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CCDC190Q86UF4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC190Q86UF4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC190Q86UF4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC190Q86UF4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC190Q86UF4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC190Q86UF4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
CCDC190Q86UF4 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC190Q86UF4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC190Q86UF4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC190Q86UF4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC190Q86UF4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC190Q86UF4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC190Q86UF4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC190Q86UF4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC190Q86UF4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC190Q86UF4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC190Q86UF4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC190Q86UF4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC190Q86UF4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC190Q86UF4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC190Q86UF4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC190Q86UF4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.26■□□□□ 0.51
CCDC190Q86UF4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC190Q86UF4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC190Q86UF4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC190Q86UF4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CCDC190Q86UF4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC190Q86UF4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC190Q86UF4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC190Q86UF4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC190Q86UF4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC190Q86UF4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC190Q86UF4 AC019171.1-201ENST00000601251 1056 ntBASIC18.25■□□□□ 0.51
CCDC190Q86UF4 SNX5-217ENST00000606557 1087 ntBASIC18.25■□□□□ 0.51
CCDC190Q86UF4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC190Q86UF4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC190Q86UF4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CCDC190Q86UF4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CCDC190Q86UF4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC190Q86UF4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC190Q86UF4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC190Q86UF4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCDC190Q86UF4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC190Q86UF4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC190Q86UF4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC190Q86UF4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC190Q86UF4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC190Q86UF4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC190Q86UF4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC190Q86UF4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC190Q86UF4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC190Q86UF4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC190Q86UF4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC190Q86UF4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC190Q86UF4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC190Q86UF4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC190Q86UF4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCDC190Q86UF4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC190Q86UF4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC190Q86UF4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CCDC190Q86UF4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC190Q86UF4 AC121338.2-201ENST00000622535 1744 ntBASIC18.23■□□□□ 0.51
CCDC190Q86UF4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC190Q86UF4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC190Q86UF4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC190Q86UF4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC190Q86UF4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms