Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.89■□□□□ 0.61
SHFQ7M4L6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHFQ7M4L6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHFQ7M4L6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHFQ7M4L6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SHFQ7M4L6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHFQ7M4L6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHFQ7M4L6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHFQ7M4L6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.88■□□□□ 0.61
SHFQ7M4L6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHFQ7M4L6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.88■□□□□ 0.61
SHFQ7M4L6 MIR4466-201ENST00000606121 54 ntBASIC18.88■□□□□ 0.61
SHFQ7M4L6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHFQ7M4L6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SHFQ7M4L6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.88■□□□□ 0.61
SHFQ7M4L6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.88■□□□□ 0.61
SHFQ7M4L6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.88■□□□□ 0.61
SHFQ7M4L6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHFQ7M4L6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.88■□□□□ 0.61
SHFQ7M4L6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHFQ7M4L6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
SHFQ7M4L6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.88■□□□□ 0.61
SHFQ7M4L6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
SHFQ7M4L6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.88■□□□□ 0.61
SHFQ7M4L6 AC073314.1-201ENST00000568729 2216 ntBASIC18.88■□□□□ 0.61
SHFQ7M4L6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHFQ7M4L6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHFQ7M4L6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHFQ7M4L6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHFQ7M4L6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.87■□□□□ 0.61
SHFQ7M4L6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHFQ7M4L6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHFQ7M4L6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHFQ7M4L6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHFQ7M4L6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.87■□□□□ 0.61
SHFQ7M4L6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SHFQ7M4L6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHFQ7M4L6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.87■□□□□ 0.61
SHFQ7M4L6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHFQ7M4L6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.86■□□□□ 0.61
SHFQ7M4L6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SHFQ7M4L6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHFQ7M4L6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHFQ7M4L6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SHFQ7M4L6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHFQ7M4L6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHFQ7M4L6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHFQ7M4L6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHFQ7M4L6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHFQ7M4L6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SHFQ7M4L6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.86■□□□□ 0.61
SHFQ7M4L6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHFQ7M4L6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.86■□□□□ 0.61
SHFQ7M4L6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHFQ7M4L6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHFQ7M4L6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
SHFQ7M4L6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHFQ7M4L6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHFQ7M4L6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHFQ7M4L6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.86■□□□□ 0.61
SHFQ7M4L6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.86■□□□□ 0.61
SHFQ7M4L6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHFQ7M4L6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SHFQ7M4L6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SHFQ7M4L6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SHFQ7M4L6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHFQ7M4L6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SHFQ7M4L6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHFQ7M4L6 PLK5-205ENST00000642079 1969 ntBASIC18.85■□□□□ 0.61
SHFQ7M4L6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHFQ7M4L6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHFQ7M4L6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHFQ7M4L6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.85■□□□□ 0.61
SHFQ7M4L6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SHFQ7M4L6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHFQ7M4L6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHFQ7M4L6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHFQ7M4L6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHFQ7M4L6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SHFQ7M4L6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHFQ7M4L6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHFQ7M4L6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHFQ7M4L6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
SHFQ7M4L6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SHFQ7M4L6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHFQ7M4L6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHFQ7M4L6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHFQ7M4L6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SHFQ7M4L6 SLC47A1P1-202ENST00000449666 945 ntBASIC18.84■□□□□ 0.61
SHFQ7M4L6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHFQ7M4L6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHFQ7M4L6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHFQ7M4L6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHFQ7M4L6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHFQ7M4L6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHFQ7M4L6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SHFQ7M4L6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SHFQ7M4L6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHFQ7M4L6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHFQ7M4L6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms