Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC1Q6VVB1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.81■□□□□ 0.6
NHLRC1Q6VVB1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NHLRC1Q6VVB1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NHLRC1Q6VVB1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NHLRC1Q6VVB1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.8■□□□□ 0.6
NHLRC1Q6VVB1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.8■□□□□ 0.6
NHLRC1Q6VVB1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NHLRC1Q6VVB1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NHLRC1Q6VVB1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NHLRC1Q6VVB1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NHLRC1Q6VVB1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NHLRC1Q6VVB1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NHLRC1Q6VVB1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NHLRC1Q6VVB1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NHLRC1Q6VVB1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NHLRC1Q6VVB1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NHLRC1Q6VVB1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NHLRC1Q6VVB1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NHLRC1Q6VVB1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NHLRC1Q6VVB1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NHLRC1Q6VVB1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NHLRC1Q6VVB1 AC092667.1-201ENST00000434301 2586 ntBASIC18.77■□□□□ 0.6
NHLRC1Q6VVB1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NHLRC1Q6VVB1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NHLRC1Q6VVB1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
NHLRC1Q6VVB1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NHLRC1Q6VVB1 CCDC92B-201ENST00000575506 885 ntBASIC18.77■□□□□ 0.6
NHLRC1Q6VVB1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.77■□□□□ 0.6
NHLRC1Q6VVB1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.77■□□□□ 0.6
NHLRC1Q6VVB1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
NHLRC1Q6VVB1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NHLRC1Q6VVB1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NHLRC1Q6VVB1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NHLRC1Q6VVB1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NHLRC1Q6VVB1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 AC005229.4-201ENST00000610085 2198 ntBASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 AC079140.4-201ENST00000507448 529 ntBASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NHLRC1Q6VVB1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NHLRC1Q6VVB1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NHLRC1Q6VVB1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NHLRC1Q6VVB1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NHLRC1Q6VVB1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NHLRC1Q6VVB1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms