Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 MKRN4P-201ENST00000444706 1521 ntBASIC22.48■■□□□ 1.19
DCLRE1AQ6PJP8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DCLRE1AQ6PJP8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
DCLRE1AQ6PJP8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.48■■□□□ 1.19
DCLRE1AQ6PJP8 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.48■■□□□ 1.19
DCLRE1AQ6PJP8 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.48■■□□□ 1.19
DCLRE1AQ6PJP8 AC133041.1-202ENST00000642053 222 ntBASIC22.48■■□□□ 1.19
DCLRE1AQ6PJP8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
DCLRE1AQ6PJP8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DCLRE1AQ6PJP8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DCLRE1AQ6PJP8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.48■■□□□ 1.19
DCLRE1AQ6PJP8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.48■■□□□ 1.19
DCLRE1AQ6PJP8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
DCLRE1AQ6PJP8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
DCLRE1AQ6PJP8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
DCLRE1AQ6PJP8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.47■■□□□ 1.19
DCLRE1AQ6PJP8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DCLRE1AQ6PJP8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DCLRE1AQ6PJP8 AC069152.1-201ENST00000438030 544 ntBASIC22.47■■□□□ 1.19
DCLRE1AQ6PJP8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.47■■□□□ 1.19
DCLRE1AQ6PJP8 AC016405.3-201ENST00000607710 860 ntBASIC22.47■■□□□ 1.19
DCLRE1AQ6PJP8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.47■■□□□ 1.19
DCLRE1AQ6PJP8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DCLRE1AQ6PJP8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DCLRE1AQ6PJP8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DCLRE1AQ6PJP8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.46■■□□□ 1.19
DCLRE1AQ6PJP8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
DCLRE1AQ6PJP8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DCLRE1AQ6PJP8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
DCLRE1AQ6PJP8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
DCLRE1AQ6PJP8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
DCLRE1AQ6PJP8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
DCLRE1AQ6PJP8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
DCLRE1AQ6PJP8 MIPEPP3-201ENST00000412105 444 ntBASIC22.46■■□□□ 1.19
DCLRE1AQ6PJP8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DCLRE1AQ6PJP8 AC093787.1-201ENST00000450396 207 ntBASIC22.46■■□□□ 1.19
DCLRE1AQ6PJP8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.46■■□□□ 1.19
DCLRE1AQ6PJP8 MIR4758-201ENST00000577688 71 ntBASIC22.46■■□□□ 1.19
DCLRE1AQ6PJP8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.46■■□□□ 1.19
DCLRE1AQ6PJP8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
DCLRE1AQ6PJP8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
DCLRE1AQ6PJP8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
DCLRE1AQ6PJP8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
DCLRE1AQ6PJP8 AL117328.2-201ENST00000624617 1940 ntBASIC22.45■■□□□ 1.18
DCLRE1AQ6PJP8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DCLRE1AQ6PJP8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.45■■□□□ 1.18
DCLRE1AQ6PJP8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.45■■□□□ 1.18
DCLRE1AQ6PJP8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.45■■□□□ 1.18
DCLRE1AQ6PJP8 KRT18P6-201ENST00000555540 1265 ntBASIC22.45■■□□□ 1.18
DCLRE1AQ6PJP8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
DCLRE1AQ6PJP8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.45■■□□□ 1.18
DCLRE1AQ6PJP8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DCLRE1AQ6PJP8 C11orf96-202ENST00000528572 1834 ntBASIC22.45■■□□□ 1.18
DCLRE1AQ6PJP8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DCLRE1AQ6PJP8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DCLRE1AQ6PJP8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
DCLRE1AQ6PJP8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
DCLRE1AQ6PJP8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
DCLRE1AQ6PJP8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
DCLRE1AQ6PJP8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
DCLRE1AQ6PJP8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
DCLRE1AQ6PJP8 RARRES2P4-201ENST00000514074 484 ntBASIC22.44■■□□□ 1.18
DCLRE1AQ6PJP8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
DCLRE1AQ6PJP8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.44■■□□□ 1.18
DCLRE1AQ6PJP8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.44■■□□□ 1.18
DCLRE1AQ6PJP8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.43■■□□□ 1.18
DCLRE1AQ6PJP8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DCLRE1AQ6PJP8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DCLRE1AQ6PJP8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.43■■□□□ 1.18
DCLRE1AQ6PJP8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.43■■□□□ 1.18
DCLRE1AQ6PJP8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.43■■□□□ 1.18
DCLRE1AQ6PJP8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DCLRE1AQ6PJP8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.43■■□□□ 1.18
DCLRE1AQ6PJP8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.43■■□□□ 1.18
DCLRE1AQ6PJP8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.43■■□□□ 1.18
DCLRE1AQ6PJP8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.43■■□□□ 1.18
DCLRE1AQ6PJP8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.43■■□□□ 1.18
DCLRE1AQ6PJP8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
DCLRE1AQ6PJP8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
DCLRE1AQ6PJP8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
DCLRE1AQ6PJP8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
DCLRE1AQ6PJP8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
DCLRE1AQ6PJP8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
DCLRE1AQ6PJP8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
DCLRE1AQ6PJP8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
DCLRE1AQ6PJP8 AC245052.3-201ENST00000450182 901 ntBASIC22.42■■□□□ 1.18
DCLRE1AQ6PJP8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
DCLRE1AQ6PJP8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
DCLRE1AQ6PJP8 ECEL1P1-201ENST00000373592 1742 ntBASIC22.42■■□□□ 1.18
DCLRE1AQ6PJP8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.42■■□□□ 1.18
DCLRE1AQ6PJP8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
DCLRE1AQ6PJP8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms